Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_55960 |
Symbol | pctC |
ID | 4382586 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 4994810 |
End bp | 4996708 |
Gene Length | 1899 bp |
Protein Length | 632 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639327099 |
Product | chemotactic transducer PctC |
Protein accession | YP_792652 |
Protein GI | 116052341 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.289325 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 53 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTCGCT CGCTGTCGTT TGCCAAGAAA ATCCTTCTCG CCGCCGCATT GGTGGTGGTT TTCGCCTTCA CCTGCTTCAT CCTCTACAAC GATTACCGAC AGCGCGAGGC CGTGCGCACG GACACGGAAA ACTACCTCGG GGAAATCGGC ACCCTGACCG CCAGCAACAT CCAGAGCTGG CTGGAAGGCC GCATGCATCT GGTGGAAGGC CTGGCCTCGC AACTGGCGCT GCTCGACCAG CCCGACGAGG CGAATATCGC AAGGCAACTG GAACAGCCCG TCTTCAGCCG CAATTTCGCG TCGGTCTATC TTGGCGAGGC GGCCAGCGGC GCCTTCACCA TGCGCCCCTA CGACGCCATG CCGGAAGGTT ACGACCCACG TACCCGCGCC TGGTACAAGG ACGCGCTGGC GGCCGACCGG CTGATCGTCA CCGAACCCTT CGTCGATGCC GGCACCGGCG AGCAGATCCT CGCCATGTCG CTGCCGGTGC GGCACGCCGG TCAACTGCTG GGCGTCGCCG CCGGCGACAT GAAGCTGGAG ACCCTGACCG CGATCCTCAA TTCCCTGAAG TTCGATGGTG CCGGCTACGC CTTCCTGGTC AGCGACGCCG GCAAGATCCT CCTCCACCCC GACTCCGGGC TGGTCCTGAA GACCCTCGCC GAAGCCTATC CCAAGGGCGC ACCGAACATC GACCCCGGGG TCCACGAGGT GGAACTCGAC GGCCGCAGCC AGTTCGTTTC CTTCACCCCG GTGAAGGGAC TGCCCGGCGT GACCTGGTAC GTCGCCCTGG TCCTCGACCG CGACACCGCC TATTCGATGC TCAGCGAATT CCGCACTTCG GCGATCGTCG CCACGCTGAT CGCGGTGGTC GGCATCATGC TTCTCCTCGG CATGCTGATC CGCGTACTGA TGCAGCCGCT CACCGACATG GGCCGCGCCA TGCAGGACAT CGCCCAGGGC GAAGGCGACC TGACCAAGCG CCTGCGGGTC ACCAGCAACG ATGAATTCGG TACGTTGGCC AATGCCTTCA ACCGCTTCGT CGAGCGTATC CACGAATCGA TCCGCGAGGT CGCCGGCACC GCTCGCCAAC TGCACGACGT GGCGCAACTG GTGGTGAACG CCTCGAACTC TTCGATGGCC AACTCCGACG AGCAGTCCAA CCGTACCAAC AGCGTCGCCG CGGCGATCAA CGAACTCGGT GCCGCCGCCC AGGAAATCGC CCGCAACGCC GCCGATGCCT CGCACCATGC GTCCGACGCC AACCACCAGG CCGAGGACGG CAAGCAGGTG GTCGAGCAGA CCATCCGCGC GATGAACGAG CTTTCCGAGA AGATCAGCGC CTCCTGCGCC AACATCGAGG CCCTGAACAG CCGCACGGTG AACATCGGCC AGATCCTCGA GGTGATCAAG GGCATCTCCG AGCAGACCAA CCTGCTTGCC CTCAACGCCG CCATCGAAGC CGCCCGCGCC GGCGAGGCCG GACGCGGCTT CGCGGTGGTC GCCGACGAGG TGCGCAACCT GGCCCATCGC GCCCAGGAGT CGGCCCAGCA GATCCAGAAG ATGATCGAAG AGCTGCAAGT CGGCGCCCGC GAGGCGGTGG CCACCATGAC CGAAAGCCAG CGCTACAGCC TGGAGAGCGT GGAGATCGCC AACCGTGCCG GCGAACGCCT GGGCAGCGTG ACCAGCCGGA TCGGCGAGAT CGACAGCATG AACCAGTCGG TGGCCACCGC CACCGAGGAA CAGACCGCGG TGGTCGACTC GCTGAACATG GACATCACCG AGATCAACAC CCTCAACCAG GAAGGCGTGG AGAACCTCCA GGCCACCCTG CGCGCCTGCG GCGAGCTGGA AGCCCAGGCC GGGCGCCTGC GGCACCTGGT GGACAGCTTC AAGATCTGA
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Protein sequence | MLRSLSFAKK ILLAAALVVV FAFTCFILYN DYRQREAVRT DTENYLGEIG TLTASNIQSW LEGRMHLVEG LASQLALLDQ PDEANIARQL EQPVFSRNFA SVYLGEAASG AFTMRPYDAM PEGYDPRTRA WYKDALAADR LIVTEPFVDA GTGEQILAMS LPVRHAGQLL GVAAGDMKLE TLTAILNSLK FDGAGYAFLV SDAGKILLHP DSGLVLKTLA EAYPKGAPNI DPGVHEVELD GRSQFVSFTP VKGLPGVTWY VALVLDRDTA YSMLSEFRTS AIVATLIAVV GIMLLLGMLI RVLMQPLTDM GRAMQDIAQG EGDLTKRLRV TSNDEFGTLA NAFNRFVERI HESIREVAGT ARQLHDVAQL VVNASNSSMA NSDEQSNRTN SVAAAINELG AAAQEIARNA ADASHHASDA NHQAEDGKQV VEQTIRAMNE LSEKISASCA NIEALNSRTV NIGQILEVIK GISEQTNLLA LNAAIEAARA GEAGRGFAVV ADEVRNLAHR AQESAQQIQK MIEELQVGAR EAVATMTESQ RYSLESVEIA NRAGERLGSV TSRIGEIDSM NQSVATATEE QTAVVDSLNM DITEINTLNQ EGVENLQATL RACGELEAQA GRLRHLVDSF KI
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