| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_55920 |
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| Symbol | |
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| ID | 4382583 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | - |
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| Start bp | 4991824 |
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| End bp | 4993074 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639327096 |
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| Product | putative type II secretion system protein |
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| Protein accession | YP_792649 |
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| Protein GI | 116052338 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4964] Flp pilus assembly protein, secretin CpaC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.0275442 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATCGGA GCACCGGGAT AGGCGTGTCG CGCTGGCTGG GAGGGCTGCT GGGGGGGGCG
TTGGCGCTGC CGGCACTGGC TTTGCCGCAG GGCTGCATCG AGTTGCTGGC GCAGGCGCCG
CGGGTCGACG TCGTCCAGGG ACAACAGCGT GACCTGCGCC TGGCGGTGCC GATCGAGCGG
CTGGCCATCG GCGATCCGAA GATCGCAGAC GTACAGTTGC TGGATCGTCG CGGCTTCCTG
GTCACCGGCA AGGAACAGGG CTCCACCAGC CTGCTGATCT GGACCGGCTG CAGTCCCGAG
CCGTTGCGCA GCCTGGTGGA GGTCGAGGGA CGCGGTAGCG TCGATACCCG CGGTGCTCCA
GCGTTCACCG CCGGCGCCGC GGAGGAGCTA CCGAACCAGG TGCAGACCGA TATCCGCTTC
GTCGAGGTCA GCCGCAGCAA GCTGAAGCAG GCCAGCACCT CGTTCGTCCG GCGCGGCGGC
AACCTCTGGG TGCTCGGTGC GCCAGGCAGC CTCGGCGACA TCAAGGTCAA TGCCGACGGC
AGCGGCCTGG GCGGCACCTT CGGCACCGGC AGCTCGGGAT TCAACCTGAT CTTCGGCGGC
GGCAAGTGGT TGAGCTTCAT GAATGCCCTG GAGGGCAGCG GCTTCGCCTA TACCCTGGCG
CGCCCGAGCC TGGTGGCGAT GAGCGGGCAG AGCGCGTCGT TCCTCGCCGG CGGCGAGTTT
CCGATCCCGG TGCCGAACGG CACCAACGAC AACGTCACCA TCGAATACAA GGAGTTCGGC
ATCCGCCTGA CCCTCACCCC GACGGTGATG AACAACCGCC GCATCGCTCT CAAGGTGGCG
CCGGAGGTCA GCGAACTGGA CTACAGCGCC GGCATCCAGA GCGGCGGGGT GGCGGTGCCG
GCACTGCGCG TCCGGCGCAC CGACACCAGC GTGATGCTGG CCGATGGCGA GAGTTTCGTG
ATCAGCGGGC TGACCAGCAG CAACTCGGTG AGCAACGTCG ACAAGTTTCC CTGGCTGGGC
GACATCCCGA TCCTCGGTGC GTTCTTCCGC TCGACCAAGC TGGACAAGGA CGACCGCGAG
CTGCTGATGA TCGTCACCCC GCACCTGGTC CAGCCGCTGG CCGCCGACGC ACAGTTGCCG
GACCTGCCCG GCGAGGGCTT GCGGCACTAC GATCCGGGGT TCTCGCGCCT GTACTTCCTC
GAGCGCGGCG AGTACGACGG CCAGCAGAAC GACACCGGCC TGTCGGATTA G
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| Protein sequence | MHRSTGIGVS RWLGGLLGGA LALPALALPQ GCIELLAQAP RVDVVQGQQR DLRLAVPIER
LAIGDPKIAD VQLLDRRGFL VTGKEQGSTS LLIWTGCSPE PLRSLVEVEG RGSVDTRGAP
AFTAGAAEEL PNQVQTDIRF VEVSRSKLKQ ASTSFVRRGG NLWVLGAPGS LGDIKVNADG
SGLGGTFGTG SSGFNLIFGG GKWLSFMNAL EGSGFAYTLA RPSLVAMSGQ SASFLAGGEF
PIPVPNGTND NVTIEYKEFG IRLTLTPTVM NNRRIALKVA PEVSELDYSA GIQSGGVAVP
ALRVRRTDTS VMLADGESFV ISGLTSSNSV SNVDKFPWLG DIPILGAFFR STKLDKDDRE
LLMIVTPHLV QPLAADAQLP DLPGEGLRHY DPGFSRLYFL ERGEYDGQQN DTGLSD
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