Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_55890 |
Symbol | |
ID | 4382581 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 4989368 |
End bp | 4990633 |
Gene Length | 1266 bp |
Protein Length | 421 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639327094 |
Product | putative type II secretion system protein |
Protein accession | YP_792647 |
Protein GI | 116052336 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 57 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACGG GATTCGGCGC GCGTCCTGAC GGCGGTGCCT TCCACTACCG CCAGGAGCAG GACATCCAGG CGCTGAAGCT GCGCCTGCAC CGCTACATCA TCGACGAGAT CGACGAAGAC GGCATGAACC TGCTGGAGGG CGCGCGCTCC GCCGTGGTCC AGTACGTCTC GGAAAAGGTC TGCGAATACG GCTCGCGCCA TCAACTGGCG ATCTCCCGCT ACGAACTGGA CCGCCTGGCC GAAGAGGTGG TCGACGAACT CACCGGCTTC GGCCCGCTGG AGATCCTCCT GCGCGATCCC GGCGTCTCGG AAATCCTCGT CAACGGACCG GGCCGGGTGT TCGTCGAGCG GGAAGGGCGG CTCTACCAGA GCGACCTGCG CTTCATCGAC GACCACCATG TGCTGCGGGT GATCCAGCGT ATCCTCGCGC CCCTCGGCCG ACGCCTGGAC GAGTCCAGCC CGATGGTCGA CGCGCGCCTG CCGGACGGCA GCCGGGTCAA CGCGATCATT CCCCCGGTGG CGCTGGACGG GCCGTGCATC TCGATCCGCA AGTTCAGCCA GGAGCTGCTG CGCAGTGCCG ACCTGCTGGC CTACCAGAGC GTCGACGAAG CCTTGCTCGA GTTCCTCCGC CAGGCGGTCT CGCGCCGCTG CAACATCCTC ATCAGTGGCG GCACCGGCAC CGGCAAGACC ACCTTGCTCA ACGTCATCAG CGGCTTCATC GACGAACGCG AGCGGATCGT CACCATCGAG GACACCGCCG AGCTGCAACT CGGCCACGAC CACGTGGTGC GCCTGGAGAC CCGTCCGCCG AACGCCGAGG GCTACGGCGA GGTGACCGCC CGCGACCTGA TCCGCAACGC CCTGCGGATG CGCCCGGACC GGATCATCCT CGGCGAGATC CGCGGCGTCG AGGTGCTCGA CGTGCTGCAG GCGATGAACA CCGGCCACGA CGGCTCGATG AGCACGGTGC ACGCCAACTC GGCGATGGAT TCGCTGCTGC GCATGGAGAT GCTGGTCGGC CTGACCGGCA ACAGGCTGCC GGAGCAGACC TTGCGCCTGA TGATCTGCGC CGCGCTGGAC GTGGTGGTGC AGATCACCCG CCTGGCCAGC GGTCGGCGTT GCATCAGCGA AGTGCTGGAG GTGCTGGAGG TGCGCGACGG CGTGTACGTC ACCAATACCC TGTTCAGTCT CGACCGGCGC GGTAGCGGGC AGTTCGTCCG CCAGGCCGCG CCGGTCGGGC AGAAATTCCG CCAGGCGCTG CTGTGA
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Protein sequence | MSTGFGARPD GGAFHYRQEQ DIQALKLRLH RYIIDEIDED GMNLLEGARS AVVQYVSEKV CEYGSRHQLA ISRYELDRLA EEVVDELTGF GPLEILLRDP GVSEILVNGP GRVFVEREGR LYQSDLRFID DHHVLRVIQR ILAPLGRRLD ESSPMVDARL PDGSRVNAII PPVALDGPCI SIRKFSQELL RSADLLAYQS VDEALLEFLR QAVSRRCNIL ISGGTGTGKT TLLNVISGFI DERERIVTIE DTAELQLGHD HVVRLETRPP NAEGYGEVTA RDLIRNALRM RPDRIILGEI RGVEVLDVLQ AMNTGHDGSM STVHANSAMD SLLRMEMLVG LTGNRLPEQT LRLMICAALD VVVQITRLAS GRRCISEVLE VLEVRDGVYV TNTLFSLDRR GSGQFVRQAA PVGQKFRQAL L
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