Gene PA14_54540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_54540 
Symbol 
ID4385301 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp4835069 
End bp4836052 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content67% 
IMG OID639326972 
Producthypothetical protein 
Protein accessionYP_792531 
Protein GI116048669 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000174239 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value0.0908275 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGATGA AACTGTCTTT TCGTCCCCTC GCCTTGGTTG CCGCCGGCCT GCTGCTGGCC 
GGCGCCGCCG TGGCCGAACC CAAGCGTCCC GAATGCATCG CCCCGGCGTC CCCCGGCGGC
GGTTTCGACC TCACCTGCAA GCTGGCGCAG AGCGCCCTGG TCGAGGCCAA GCTGCTGAGC
AAGCCGATGC GTGTCACCTA CATGCCCGGC GGCGTCGGCG CGGTCGCCTA TAACGCGGTG
GTCGCCCAAC GCCCGGGCGA CGCCGGCACC ATCACCGCCT TCTCCAGCGG CTCGCTGCTG
AACCTGGCCC AGGGCAAGTT CGGCCGCTTC GACGAGAACG CGGTGAAATG GCTGGCCGCC
ATCGGCACCA GCTACGGCGC CATCGCGGTG CGCACCGATT CGCCCTACAA GAACCTCGAC
GACCTGGTGA AGGCGCTCAA GGCCGACCCG AGCAAGGTGG TGATCGGCTC CGGCGGCACC
GTCGGCAGCC AGGACTGGAT GCAGACCGCG CTGATCGCCA AGGCCGCCGG GATCAATCCG
CGCGACCTGC GCTACGTGGC CCTGGAAGGC GGCGGCGAGA TCGCCACCGC GCTGCTCGGC
GGGCACATCC AGGTCGGCAG CACCGACATT TCCGACTCCA TGCCGCACAT CCTCAGCGGC
GACATGCGCC TGCTCGCGGT GTTCTCCGAA GAACGCCTGC CGGAGGCGGC GATGGCCAAC
ATCCCCACCG CCAAGGAACA GGGCTACGAC ATCGTCTGGC CGGTAGTTCG CGGGTTCTAC
CTCGGGCCGA AGGTCAGCGA CGAAGACTAC GCCTGGTGGA AGAACGCCTT CGACCAACTG
CTGGCCTCCG AGGACTTCGC CAAGCTGCGC GACCAGCGCG AGCTGTTCCC CTTCGCCATG
ACCGGCGAGG AACTCGACGG CTACGTGAAG CAGCAGGTCC AGCAGTACAA GCAACTGGCC
AAGGACTTCG GCCTGATCCA GTAA
 
Protein sequence
MMMKLSFRPL ALVAAGLLLA GAAVAEPKRP ECIAPASPGG GFDLTCKLAQ SALVEAKLLS 
KPMRVTYMPG GVGAVAYNAV VAQRPGDAGT ITAFSSGSLL NLAQGKFGRF DENAVKWLAA
IGTSYGAIAV RTDSPYKNLD DLVKALKADP SKVVIGSGGT VGSQDWMQTA LIAKAAGINP
RDLRYVALEG GGEIATALLG GHIQVGSTDI SDSMPHILSG DMRLLAVFSE ERLPEAAMAN
IPTAKEQGYD IVWPVVRGFY LGPKVSDEDY AWWKNAFDQL LASEDFAKLR DQRELFPFAM
TGEELDGYVK QQVQQYKQLA KDFGLIQ