Gene PA14_54520 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_54520 
Symbol 
ID4385205 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp4833756 
End bp4835039 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content64% 
IMG OID639326971 
Productporin 
Protein accessionYP_792530 
Protein GI116048670 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0211699 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value0.223535 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGACTT CCCTGCCGCA GGCCGCAAGG TCTGTACGTT TGTCCCGCAG CACCACCCTG 
ACCACCACCG CCGTCGTGCT CGCCGGCATC GCGCCCCTGG GCAACGCCGC CGGCTTCCTC
GAAGACAGCA AGGCCAGCCT GGAAACCCGC AACTTCTACA TGAACCGCGA CTTCCGCGAC
GGCCCCGGCC AGTCCAAGCG CGAGGAGTGG GCGCAAGGCT TCATCCTCAA CCTGCAGTCC
GGCTACACCC AGGGCACCGT CGGCTTCGGC CTCGACGCCA TGGGCATGCT CGGCGTCAAG
CTCGACTCCG GCCGCGGCCG CAGCGGTACC GGACTGCTGC CGAAGGATTC CGACGGCCGC
GCGCCGGACA CCTACTCGAA ACTGGGCCTG ACCGCCAAGG TCAAGGTCTC GCAGAGCGAG
CTGAAGGTCG GCACGCTGAT TCCGAAGCTG CCATCGGTAC AACCGAACAA CGGGCGGATC
TTCCCGCAGA TATTCGAAGG TGCACTGCTC ACCTCGAAGG AGATCAAGGA CCTCGGCTTC
ACCGCCGGGC GCCTGGAAAA GACCAAGATC CGCGACTCCA GCGACTCCGA GGACCTCGCG
CTGAACGACA AGAACGGCCG CTTCGCCGGG GTCAGCGCCG ATCACTTCGA CCTCGGCGGA
CTGGACTACA AGCTCACCGA CCAACTCACC GCCAGCTATC ACTACAGCAA CCTGCAGGAC
GTCTACCGCC AGCACTTCGT CGGCCTGCTG CACAGCTGGC CGATCGGTCC CGGCGAACTG
ACCAGCGACC TGCGCTTCGC CCGCAGCACC GACAGCGGCT CGGCCAAGGC CGGCGGCATC
GACAACAAGT CGCTCAACGG CATGTTCACC TACAGCCTTG GCAACCATGC CTTCGGCGCG
GCCTGGCAGC GAATGAACGG CGACGACGCC TTCCCCTACC TGGAAGGCAG CAACCCGTAC
CTGGTCAACT TCGTCCAGGT CAACGACTTC GCCGGCCCCA AGGAGCGTTC CTGGCAACTG
CGCTACGACT ACGACTTCGT CGGCCTCGGC ATTCCCGGCC TGACCTTCAT GACCCGCTAC
GTCAAGGGCG ACAATGTCGA ACTCGCCGGG CAGAGCGGCG AAGGCCGCGA ATGGGAACGC
AACACCGAAC TGCAGTACGT GTTCCAGAGC GGCGCGCTGA AGAACCTCGG AATCCGCTGG
CGCAACGCGA CCTTCCGTTC CAATTTCACC CGCGACATCG ATGAGAACCG CCTGATCGTC
AGCTATACCC TGCCGATCTG GTAA
 
Protein sequence
MSTSLPQAAR SVRLSRSTTL TTTAVVLAGI APLGNAAGFL EDSKASLETR NFYMNRDFRD 
GPGQSKREEW AQGFILNLQS GYTQGTVGFG LDAMGMLGVK LDSGRGRSGT GLLPKDSDGR
APDTYSKLGL TAKVKVSQSE LKVGTLIPKL PSVQPNNGRI FPQIFEGALL TSKEIKDLGF
TAGRLEKTKI RDSSDSEDLA LNDKNGRFAG VSADHFDLGG LDYKLTDQLT ASYHYSNLQD
VYRQHFVGLL HSWPIGPGEL TSDLRFARST DSGSAKAGGI DNKSLNGMFT YSLGNHAFGA
AWQRMNGDDA FPYLEGSNPY LVNFVQVNDF AGPKERSWQL RYDYDFVGLG IPGLTFMTRY
VKGDNVELAG QSGEGREWER NTELQYVFQS GALKNLGIRW RNATFRSNFT RDIDENRLIV
SYTLPIW