Gene PA14_54040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_54040 
Symbol 
ID4384740 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp4791877 
End bp4793292 
Gene Length1416 bp 
Protein Length471 aa 
Translation table11 
GC content65% 
IMG OID639326934 
Productamino acid permease 
Protein accessionYP_792493 
Protein GI116048707 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1113] Gamma-aminobutyrate permease and related permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones65 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGTCTG TCGGCGAACA GAAGGTTCAA GACGGCTCCC TGAAGCGCGA GCTCGGTGAG 
CGACACATCC GCCTGATGGC GCTCGGCGCC TGTATCGGCG TCGGCCTGTT CCTGGGCTCG
GCGAAGGCCA TCCAGATGGC CGGCCCGGCC ATCATGATCT CCTACATCCT TGGCGGCCTG
GCGATCCTGG TGATCATGCG CGCCCTCGGC GAGATGGCGG TACACAATCC GGTGGCCGGT
TCCTTCAGCC AGTACGCCAA GGATTACCTG GGCCCGCTGG CGGGCTTCAT CACCGGCTGG
AACTACTGGT TCCTCTGGCT GGTGACCTGT GTCGCCGAGA TCACCGCCGT CGCCGTCTAC
ATGGGCATCT GGTTCCCCGA CGTGCCGCGC TGGATCTGGG CCCTGGCGGC CCTGGCGAGC
ATGGGCACGA TCAACCTCAT CGCGGTGCGT GCCTTCGGCG AGTTCGAGTT CTGGTTCGCC
CTGATCAAGA TCGTCACCAT CCTGGCGATG GTGGTGGTCG GCATCGGCAT GATCGCCTTC
GGCTTCGGCA ACGACGGCAT CGCCACCGGT ATCTCCAACC TCTGGGCCCA CGGCGGCTTC
ATGCCCAATG GCATCCAGGG CGTGCTGATG TCGCTGCAGA TGGTGATGTT CGCCTACCTC
GGGGTGGAAA TGATCGGCCT CACCGCCGGC GAAGCGCGTA ACCCGACCAA GACCATTCCC
AGCGCGATCA ACTCGGTGTT CTGGCGCATC CTGCTGTTCT ATGTCGGCTC GCTGTTCGTG
ATCATGTCGC TCTATCCGTG GAACGAGATC GGCACCCAGG GCAGCCCCTT CGTGATGACC
TTCGAGCGCA TGGGCATCAA GACCGCCGCC GGGATCATCA ACTTCGTGGT GATCACCGCC
GCGCTGTCGT CCTGCAACGG CGGCATCTTC AGCACCGGGC GCATGCTCTA CAGCCTGGCC
CAGCATCGCC AGGCCCCGGC CTTCTTCGGC AAGGCCTCGC GCAGCGGCGT ACCGCGCCGG
GCGCTGATCC TGTCGATCCT GGCGCTGCTG CTGGGCGTGT TGCTGAACTA CCTGGTGCCG
GAGAAGGTGT TCGTCTGGGT GACCTCCATC GCCACCTTCG GCGCGATCTG GACCTGGGCG
ATGATCCTGC TGGCCCAGTT GCGCTTCCGC AAGACGCTCA GCCCGGCCGA GTGCGACAAG
CTGCAATACC GCATGTGGCT GTACCCGCTC AGTTCCTACC TGGCGCTGGC GTTCCTGGTG
ATGGTGGTGG TGCTGATGGC CTTCTTCGAG GACACCCGCA TCGCCCTCTA CATCGGCCCG
CCGTTCATCC TGCTGCTGAC CGTCCTGTAC TACGCCTTCA ACCTGGCGCC GAAGGAGCCT
GCCGGCACCG GCTCGGTAAG CCGCGCGGCG TCCTGA
 
Protein sequence
MSSVGEQKVQ DGSLKRELGE RHIRLMALGA CIGVGLFLGS AKAIQMAGPA IMISYILGGL 
AILVIMRALG EMAVHNPVAG SFSQYAKDYL GPLAGFITGW NYWFLWLVTC VAEITAVAVY
MGIWFPDVPR WIWALAALAS MGTINLIAVR AFGEFEFWFA LIKIVTILAM VVVGIGMIAF
GFGNDGIATG ISNLWAHGGF MPNGIQGVLM SLQMVMFAYL GVEMIGLTAG EARNPTKTIP
SAINSVFWRI LLFYVGSLFV IMSLYPWNEI GTQGSPFVMT FERMGIKTAA GIINFVVITA
ALSSCNGGIF STGRMLYSLA QHRQAPAFFG KASRSGVPRR ALILSILALL LGVLLNYLVP
EKVFVWVTSI ATFGAIWTWA MILLAQLRFR KTLSPAECDK LQYRMWLYPL SSYLALAFLV
MVVVLMAFFE DTRIALYIGP PFILLLTVLY YAFNLAPKEP AGTGSVSRAA S