Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_53750 |
Symbol | |
ID | 4382806 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 4764997 |
End bp | 4766244 |
Gene Length | 1248 bp |
Protein Length | 415 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639326910 |
Product | hypothetical protein |
Protein accession | YP_792469 |
Protein GI | 116048731 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0520] Selenocysteine lyase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.000314396 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.0111206 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCGC TCTTCCCCGC CGGCCCCGAC GCCTTCGGTG CCGACGAACT GCTGCGCCTG CGCCGCGAGA CCCCGGCCTG GGGCAGCTAC GCGCACTTCG CCCATGGCTC CGCCAGCCTG CCGCCGCAGG TGCTCTACGA CGCCCTCGAC AGCTGGCTGG AAGCCGAGCG GCGCTGGGGC GTGCAGCGCG CCGCCGAGCA TTTCGCCGAG CCCTTGCTGG CGGTCCGCGA CAGCGTCGCG CGAGTGCTCG GCACCCAGCC ACGGCACATC GCCCTGCTCG ACTGCGCCAG CCGCGCCTGG TCGGTGGCCT TTGCCGCGGC CCTGGCCGCC CATCCACGGA TACGGGCGAT CAGCAGCTTC GACGAATATG GTTCCAACAG CCTGTGCCTG CTCGCCGCGC GCCAGCAGCG CGGGCTGGAG CTGCGCCTGA TCGACGCACG CGGCGACGCC GCACAGCTGT TGCAACGGCT TGACGAGCAG TTGCACGACC TCGCCCCCGG CCAGACGCCG CTGCTGTCGC TCAGCGCGGT GCCCACCGGG CATGGCGCGG CTACCGCGCT GGAGGGCGTA GCCGAGCGCA TCCGCGCCCA TGACGGGCTG TTCTTCCTCG ATGCCAGCCA TGCGGTCGGC CAGTTGCCGC TGGCGGTGGA GGCGACCGGC TGCGACGTGC TGGTGTTCCC GCCACGCAAG TGGCTGCGCG GGCCAAAGGG ACTCGGCGTG CTCTATCTCG GCGAACGTGC CCTGGAGCGC CTAGCCCTGC CCGACGGGCT GGACGTCGGC GGCGCGCAAT GGAGCGACGC CTTCGCCCTG CAGGCGCGGG ATGACGCGCG GCGCTTCGAA TGCTCGGAGT TCAACCCGGG GCTGCGCCTG GCGCTCAAGG CCAGTTGCGA CTACCTGTTG CAGACCGATG TCCGGCGCAT CGCCCGACGC AACCGCCAGT TGCGCGAACG CATCGCCCAG CAGCTCTACC GCCGGCTCGG CTGGACGCCG CTGGAACAAG GGCCGCACGC CAGCGCGTTG ATGACCTACG CGGCCCCCGA ACTGAGCGGC GAGCAATGGC TGAAGCGCCT CCACGCGCGC GGCGTGAACG CCTCCTACAT CGGCCCGCAG TATGCCCGCT GGGCGCTGCG CGAGCAGGCG CTGCCGGGGG TACTGCGCCT GACTCCGCAC TACCTGACCG ACGACGGCGA GATCGAGCGC CTCGGCGAGG CCCTGGAGGA TTGCCTGCGA CAGCGCGCCG CCAGTTGA
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Protein sequence | MSALFPAGPD AFGADELLRL RRETPAWGSY AHFAHGSASL PPQVLYDALD SWLEAERRWG VQRAAEHFAE PLLAVRDSVA RVLGTQPRHI ALLDCASRAW SVAFAAALAA HPRIRAISSF DEYGSNSLCL LAARQQRGLE LRLIDARGDA AQLLQRLDEQ LHDLAPGQTP LLSLSAVPTG HGAATALEGV AERIRAHDGL FFLDASHAVG QLPLAVEATG CDVLVFPPRK WLRGPKGLGV LYLGERALER LALPDGLDVG GAQWSDAFAL QARDDARRFE CSEFNPGLRL ALKASCDYLL QTDVRRIARR NRQLRERIAQ QLYRRLGWTP LEQGPHASAL MTYAAPELSG EQWLKRLHAR GVNASYIGPQ YARWALREQA LPGVLRLTPH YLTDDGEIER LGEALEDCLR QRAAS
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