Gene PA14_53510 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_53510 
Symbol 
ID4384959 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp4744115 
End bp4744756 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content68% 
IMG OID639326887 
Producthypothetical protein 
Protein accessionYP_792446 
Protein GI116048754 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones61 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.000645977 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCGACAT CCCCCGCGCT GATCCGCGAA ACCTTTCCCG TCGGGCCTTT GCAGTGCAAC 
TGCACCATCA TTGGCGATCC GCTGACCAGG AAGGCCATCG TCGTCGATCC GGGCGGCGAC
CACGAACTGA TCCTGCAGCG CCTCGACCGC CTCGGCCTGC AGGTGGTCAG CATCATCCAT
ACCCACGCGC ACCTGGATCA CTTCCTCGCC TCCGGCGAGA TGAAGAAGCG CACCGGCGCC
AGCCTGCACC TGCACAAGGA CGACCAGTTC CTCTGGGACA ACCTGGAGAT GCAGTGCCAA
CTGTTCGGCG TGCCCTACAC GCCGGTGCCG GCCCCGGACC GCTGGCTGGC CGACGACGAG
GAACTGGCCT GCGGTTGCGG AGTGGCACTG CACACGCCGG GGCATACGCC GGGCTCGATG
AGTTTCTGGT TCCCCCGGGC GAAGCTGCTG ATCGCCGGCG ACACCCTGTT CCGCCGTGGC
ATCGGCCGCA CCGACCTGTG GGGCGGCGAC TCGGCGGCGA TCCAGCGTTC GATCAGGCTG
CGCCTGTACA GCCTCGACGA GGACGCCACG GTGGTCGCCG GCCACGGCCC GGACACCACG
CTGGGCGAGG AGATGCGCGA GAATCCCTTC GTCAGGGGCT GA
 
Protein sequence
MSTSPALIRE TFPVGPLQCN CTIIGDPLTR KAIVVDPGGD HELILQRLDR LGLQVVSIIH 
THAHLDHFLA SGEMKKRTGA SLHLHKDDQF LWDNLEMQCQ LFGVPYTPVP APDRWLADDE
ELACGCGVAL HTPGHTPGSM SFWFPRAKLL IAGDTLFRRG IGRTDLWGGD SAAIQRSIRL
RLYSLDEDAT VVAGHGPDTT LGEEMRENPF VRG