Gene PA14_53500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_53500 
Symbol 
ID4384960 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp4743296 
End bp4744009 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content68% 
IMG OID639326886 
Producthypothetical protein 
Protein accessionYP_792445 
Protein GI116048755 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones60 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.00118983 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTTCACCT CCCGTTGCCT GCCTCTGGCC GCAGCCGTCA CCGCACTGGC GCTGCTCGCC 
GGTTGTGCCA ACAACAACCC CTACGACACG CAAAGCCAAA GCCAGGGTGG CATGAGCAAG
ACGGCCAAGT ACGGCGGACT GGGTGCGCTG GCCGGCGCCG TCGCCGGCGC CGCGATCGAC
CACAACAACC GTGGCAAGGG CGCGTTGATC GGCGCTGCCG TTGCCGGCGC GGCCGCCGCG
GGTTATGGCT ACTACGCCGA CAAGCAGGAA GCCGAGCTGC GTCGGCAGAT GGAAGGCACC
GGCGTGGAAG TGCAGCGCCA GGGCGACGAC ATCAAGCTGA TCATGCCGGG CAACATCACC
TTCGCCACCG ATTCGGCGAA CATCGCTCCG AGCTTCTACG CGCCGCTGAA CAACCTGGCG
AACTCGTTCA AGCAGTACAA CCAGAACACC ATCGAGATCG TCGGCTACAC CGACAGCACC
GGCAGCCGCC AGCACAACAT GGACCTGTCC CAGCGTCGTG CGCAGAGCGT GGCCGGCTAC
CTGACCGCCC AGGGCGTCGA CGGCACCCGC CTGAGTACCC GCGGCATGGG CCCGGACCAG
CCGATCGCGA GCAACTCCAC CGCCGACGGT CGCGCGCAGA ACCGGCGCGT CGAGGTCAAC
CTGCGACCGG TTCCGGGCGC CCAGGGCCCG GCGCAGACCC AGCCGCAGTA CTGA
 
Protein sequence
MFTSRCLPLA AAVTALALLA GCANNNPYDT QSQSQGGMSK TAKYGGLGAL AGAVAGAAID 
HNNRGKGALI GAAVAGAAAA GYGYYADKQE AELRRQMEGT GVEVQRQGDD IKLIMPGNIT
FATDSANIAP SFYAPLNNLA NSFKQYNQNT IEIVGYTDST GSRQHNMDLS QRRAQSVAGY
LTAQGVDGTR LSTRGMGPDQ PIASNSTADG RAQNRRVEVN LRPVPGAQGP AQTQPQY