Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_53500 |
Symbol | |
ID | 4384960 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 4743296 |
End bp | 4744009 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639326886 |
Product | hypothetical protein |
Protein accession | YP_792445 |
Protein GI | 116048755 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 60 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.00118983 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTTCACCT CCCGTTGCCT GCCTCTGGCC GCAGCCGTCA CCGCACTGGC GCTGCTCGCC GGTTGTGCCA ACAACAACCC CTACGACACG CAAAGCCAAA GCCAGGGTGG CATGAGCAAG ACGGCCAAGT ACGGCGGACT GGGTGCGCTG GCCGGCGCCG TCGCCGGCGC CGCGATCGAC CACAACAACC GTGGCAAGGG CGCGTTGATC GGCGCTGCCG TTGCCGGCGC GGCCGCCGCG GGTTATGGCT ACTACGCCGA CAAGCAGGAA GCCGAGCTGC GTCGGCAGAT GGAAGGCACC GGCGTGGAAG TGCAGCGCCA GGGCGACGAC ATCAAGCTGA TCATGCCGGG CAACATCACC TTCGCCACCG ATTCGGCGAA CATCGCTCCG AGCTTCTACG CGCCGCTGAA CAACCTGGCG AACTCGTTCA AGCAGTACAA CCAGAACACC ATCGAGATCG TCGGCTACAC CGACAGCACC GGCAGCCGCC AGCACAACAT GGACCTGTCC CAGCGTCGTG CGCAGAGCGT GGCCGGCTAC CTGACCGCCC AGGGCGTCGA CGGCACCCGC CTGAGTACCC GCGGCATGGG CCCGGACCAG CCGATCGCGA GCAACTCCAC CGCCGACGGT CGCGCGCAGA ACCGGCGCGT CGAGGTCAAC CTGCGACCGG TTCCGGGCGC CCAGGGCCCG GCGCAGACCC AGCCGCAGTA CTGA
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Protein sequence | MFTSRCLPLA AAVTALALLA GCANNNPYDT QSQSQGGMSK TAKYGGLGAL AGAVAGAAID HNNRGKGALI GAAVAGAAAA GYGYYADKQE AELRRQMEGT GVEVQRQGDD IKLIMPGNIT FATDSANIAP SFYAPLNNLA NSFKQYNQNT IEIVGYTDST GSRQHNMDLS QRRAQSVAGY LTAQGVDGTR LSTRGMGPDQ PIASNSTADG RAQNRRVEVN LRPVPGAQGP AQTQPQY
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