Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_53070 |
Symbol | hpd |
ID | 4382844 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 4704698 |
End bp | 4705771 |
Gene Length | 1074 bp |
Protein Length | 357 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639326852 |
Product | 4-hydroxyphenylpyruvate dioxygenase |
Protein accession | YP_792411 |
Protein GI | 116048789 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG3185] 4-hydroxyphenylpyruvate dioxygenase and related hemolysins |
TIGRFAM ID | [TIGR01263] 4-hydroxyphenylpyruvate dioxygenase |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 62 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGCCG TGGCCAAGAT CGAACAGCAC AATCCCATCG GTACCGACGG ATTCGAATTC GTCGAGTTCA CCGCCCCCGA CGCCAAGGGC ATCGAGCAGC TGCGCCAGCT GTTCAACATG ATGGGCTTCA CCGAAACCGC CAAGCATCGT TCCAAGGAAG TCTTCCTGTT CCAGCAGAAC GATATCAACA TCGTGCTCAA CGGCAGCCCG ACCGGGCATG TCCATGAATT CGCCCTCAAG CACGGCCCGA GCGCCTGCGC CATGGCCTTC CGGGTGAAGA ACGCTTCCCA GGCCGCCGCC TACGCCGAAT CCCAGGGCGC CAAGCTGGTG GGCAGCCACG CCAACTTCGG CGAGCTGAAC ATCCCTTCCC TGGAAGGCAT CGGCGGTTCG CTGCTGTATC TTGTCGACCG CTACGGCGAC CGCAGCATCT ATGACGTCGA CTTCGAGTTC ATCGAAGGCC GCAGCGCCAA CGACAACTCG GTCGGCCTGA CCTACATCGA CCACCTGACC CACAACGTCA AGCGCGGCCA GATGGACGTC TGGTCCGGCT TCTACGAGCG CATCGCCAAC TTCCGCGAGA TTCGCTACTT CGACATCGAA GGCAAGCTCA CCGGCCTGTT CTCCCGCGCC ATGACCGCGC CTTGCGGGAA GATCCGCATC CCGATCAACG AGTCGGCCGA CGATACCTCG CAGATCGAGG AATTCATCCG CGAATACCAT GGCGAAGGCA TCCAGCACAT CGCCCTGACC ACCGACGACA TCTATGCCAC GGTGCGCAAG CTGCGCGCCA ACGGCGTGAA GTTCATGTCG ACCCCGGACA CCTACTACGA GAAGGTCGAC ACCCGCGTCG CCGGGCATGG CGAGCCGCTC GAGCAACTGC GCGAACTGAA CCTGCTGATC GACGGCGCCC CGGGCGACGA CGGCATCCTG CTGCAGATCT TCACCGACAC GGTGATCGGC CCGATCTTCT TCGAGATCAT CCAGCGCAAG GGCAACCAGG GTTTCGGCGA GGGCAATTTC AAGGCCCTGT TCGAGTCCAT CGAGGAAGAT CAGATTCGCC GCGGCGTGAT CTGA
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Protein sequence | MNAVAKIEQH NPIGTDGFEF VEFTAPDAKG IEQLRQLFNM MGFTETAKHR SKEVFLFQQN DINIVLNGSP TGHVHEFALK HGPSACAMAF RVKNASQAAA YAESQGAKLV GSHANFGELN IPSLEGIGGS LLYLVDRYGD RSIYDVDFEF IEGRSANDNS VGLTYIDHLT HNVKRGQMDV WSGFYERIAN FREIRYFDIE GKLTGLFSRA MTAPCGKIRI PINESADDTS QIEEFIREYH GEGIQHIALT TDDIYATVRK LRANGVKFMS TPDTYYEKVD TRVAGHGEPL EQLRELNLLI DGAPGDDGIL LQIFTDTVIG PIFFEIIQRK GNQGFGEGNF KALFESIEED QIRRGVI
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