Gene PA14_53070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_53070 
Symbolhpd 
ID4382844 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp4704698 
End bp4705771 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content62% 
IMG OID639326852 
Product4-hydroxyphenylpyruvate dioxygenase 
Protein accessionYP_792411 
Protein GI116048789 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG3185] 4-hydroxyphenylpyruvate dioxygenase and related hemolysins 
TIGRFAM ID[TIGR01263] 4-hydroxyphenylpyruvate dioxygenase 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones62 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCCG TGGCCAAGAT CGAACAGCAC AATCCCATCG GTACCGACGG ATTCGAATTC 
GTCGAGTTCA CCGCCCCCGA CGCCAAGGGC ATCGAGCAGC TGCGCCAGCT GTTCAACATG
ATGGGCTTCA CCGAAACCGC CAAGCATCGT TCCAAGGAAG TCTTCCTGTT CCAGCAGAAC
GATATCAACA TCGTGCTCAA CGGCAGCCCG ACCGGGCATG TCCATGAATT CGCCCTCAAG
CACGGCCCGA GCGCCTGCGC CATGGCCTTC CGGGTGAAGA ACGCTTCCCA GGCCGCCGCC
TACGCCGAAT CCCAGGGCGC CAAGCTGGTG GGCAGCCACG CCAACTTCGG CGAGCTGAAC
ATCCCTTCCC TGGAAGGCAT CGGCGGTTCG CTGCTGTATC TTGTCGACCG CTACGGCGAC
CGCAGCATCT ATGACGTCGA CTTCGAGTTC ATCGAAGGCC GCAGCGCCAA CGACAACTCG
GTCGGCCTGA CCTACATCGA CCACCTGACC CACAACGTCA AGCGCGGCCA GATGGACGTC
TGGTCCGGCT TCTACGAGCG CATCGCCAAC TTCCGCGAGA TTCGCTACTT CGACATCGAA
GGCAAGCTCA CCGGCCTGTT CTCCCGCGCC ATGACCGCGC CTTGCGGGAA GATCCGCATC
CCGATCAACG AGTCGGCCGA CGATACCTCG CAGATCGAGG AATTCATCCG CGAATACCAT
GGCGAAGGCA TCCAGCACAT CGCCCTGACC ACCGACGACA TCTATGCCAC GGTGCGCAAG
CTGCGCGCCA ACGGCGTGAA GTTCATGTCG ACCCCGGACA CCTACTACGA GAAGGTCGAC
ACCCGCGTCG CCGGGCATGG CGAGCCGCTC GAGCAACTGC GCGAACTGAA CCTGCTGATC
GACGGCGCCC CGGGCGACGA CGGCATCCTG CTGCAGATCT TCACCGACAC GGTGATCGGC
CCGATCTTCT TCGAGATCAT CCAGCGCAAG GGCAACCAGG GTTTCGGCGA GGGCAATTTC
AAGGCCCTGT TCGAGTCCAT CGAGGAAGAT CAGATTCGCC GCGGCGTGAT CTGA
 
Protein sequence
MNAVAKIEQH NPIGTDGFEF VEFTAPDAKG IEQLRQLFNM MGFTETAKHR SKEVFLFQQN 
DINIVLNGSP TGHVHEFALK HGPSACAMAF RVKNASQAAA YAESQGAKLV GSHANFGELN
IPSLEGIGGS LLYLVDRYGD RSIYDVDFEF IEGRSANDNS VGLTYIDHLT HNVKRGQMDV
WSGFYERIAN FREIRYFDIE GKLTGLFSRA MTAPCGKIRI PINESADDTS QIEEFIREYH
GEGIQHIALT TDDIYATVRK LRANGVKFMS TPDTYYEKVD TRVAGHGEPL EQLRELNLLI
DGAPGDDGIL LQIFTDTVIG PIFFEIIQRK GNQGFGEGNF KALFESIEED QIRRGVI