Gene PA14_52890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_52890 
Symbol 
ID4382859 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp4688666 
End bp4689046 
Gene Length381 bp 
Protein Length126 aa 
Translation table11 
GC content67% 
IMG OID639326837 
Productring-cleaving dioxygenase 
Protein accessionYP_792396 
Protein GI116048804 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0346] Lactoylglutathione lyase and related lyases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value0.908262 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones66 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGATCG ACCGTCTCGA CCACCTGGTG CTCACCGTCC GCGACATCGA CGCCAGCATC 
GATTTCTACA CCCGCGTACT GGGTATGCGC GCCGTTACCT TCGGCGCGGG TCGCAAGGCC
CTCGCCTTCG GTGCGCAGAA GATCAACCTG CACCAGGCCG GGGGCGAATT CGAACCCAAG
GCCGAGCGAC CTACGCCGGG GTCCGCCGAC CTCTGTTTCA TCGTCGCCAC GCCACTCGAG
GCGGTGGCCG AGCAACTGCG CCAGCAGGCC GTGGAAATCC TCGAGGGCCC GGTGCCGCGC
ACCGGCGCCG GCGGGCCGAT CCTCTCGCTG TACCTGCGCG ACCCCGACCT GAACCTGATC
GAACTGAGCA ACCTGCTGTA G
 
Protein sequence
MQIDRLDHLV LTVRDIDASI DFYTRVLGMR AVTFGAGRKA LAFGAQKINL HQAGGEFEPK 
AERPTPGSAD LCFIVATPLE AVAEQLRQQA VEILEGPVPR TGAGGPILSL YLRDPDLNLI
ELSNLL