Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_52890 |
Symbol | |
ID | 4382859 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 4688666 |
End bp | 4689046 |
Gene Length | 381 bp |
Protein Length | 126 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639326837 |
Product | ring-cleaving dioxygenase |
Protein accession | YP_792396 |
Protein GI | 116048804 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0346] Lactoylglutathione lyase and related lyases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 0.908262 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 66 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGATCG ACCGTCTCGA CCACCTGGTG CTCACCGTCC GCGACATCGA CGCCAGCATC GATTTCTACA CCCGCGTACT GGGTATGCGC GCCGTTACCT TCGGCGCGGG TCGCAAGGCC CTCGCCTTCG GTGCGCAGAA GATCAACCTG CACCAGGCCG GGGGCGAATT CGAACCCAAG GCCGAGCGAC CTACGCCGGG GTCCGCCGAC CTCTGTTTCA TCGTCGCCAC GCCACTCGAG GCGGTGGCCG AGCAACTGCG CCAGCAGGCC GTGGAAATCC TCGAGGGCCC GGTGCCGCGC ACCGGCGCCG GCGGGCCGAT CCTCTCGCTG TACCTGCGCG ACCCCGACCT GAACCTGATC GAACTGAGCA ACCTGCTGTA G
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Protein sequence | MQIDRLDHLV LTVRDIDASI DFYTRVLGMR AVTFGAGRKA LAFGAQKINL HQAGGEFEPK AERPTPGSAD LCFIVATPLE AVAEQLRQQA VEILEGPVPR TGAGGPILSL YLRDPDLNLI ELSNLL
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