| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_51740 |
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| Symbol | tolR |
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| ID | 4384458 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | - |
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| Start bp | 4596529 |
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| End bp | 4596969 |
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| Gene Length | 441 bp |
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| Protein Length | 146 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639326741 |
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| Product | TolR protein |
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| Protein accession | YP_792304 |
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| Protein GI | 116048895 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0848] Biopolymer transport protein |
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| TIGRFAM ID | [TIGR02801] TolR protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.0101841 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.0000169267 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGCAAGGG TTCGTCACAA GCGCAAGCCG GTCGCGGAAA TGAACGTGGT GCCTTACATC
GACGTGATGC TGGTACTGCT GGTGATTTTC ATGGTGACCG CACCGATGCT CAACCAGGGG
GTCAAGGTCG ACCTGCCGAA GGTGTCCAGC GAGGCGTTGC CTCAGGACAA CAACAAGCAG
GTCCTGACCC TTTCGGTGAA AGCCGACGGT TCCTATTACT GGAACGTCGG CAGCGAAGTG
GATACTGAAA AACAGACCGA TAGTGCCGTG TCGTTGGAGC AGATGACCGA TGCAGTCACC
AAGATCATGA GTGCCCGTCC GGACACCCAG GTATTCATCC GCGGCGACAA GGCGGTGAAC
TATGGTGCGG TGGTTGGCGC CATGGGTGCC TTGCAGCAGG CCGGTGTGCC CAACGTCGGG
TTGATTACCG AGGCCCCCTG A
|
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| Protein sequence | MARVRHKRKP VAEMNVVPYI DVMLVLLVIF MVTAPMLNQG VKVDLPKVSS EALPQDNNKQ
VLTLSVKADG SYYWNVGSEV DTEKQTDSAV SLEQMTDAVT KIMSARPDTQ VFIRGDKAVN
YGAVVGAMGA LQQAGVPNVG LITEAP
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