| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_51100 |
|---|
| Symbol | |
|---|
| ID | 4380632 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | - |
|---|
| Start bp | 4541023 |
|---|
| End bp | 4542168 |
|---|
| Gene Length | 1146 bp |
|---|
| Protein Length | 381 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639326683 |
|---|
| Product | acyl-CoA dehydrogenase |
|---|
| Protein accession | YP_792248 |
|---|
| Protein GI | 116048950 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.28895 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.000000076859 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGACCGACT ACGACAATCT CGACGACAAC GCCTTTCGCC TGATGGTCCG TGAGTGGATC
GCCGCCAACT ATCCGCAGCG CATCCGCAAT CCGCCCCGTC GCCTGGGGCG CGAGGAAACC
CGCGAGTGGT ACCTGCTGTT GTCGCGCCAG GGCTGGCTGT GTCCCGGCTG GCCCAGGGAG
TACGGCGGCA TGGGGCTGAG CGCCGGCAAG CAACTGATCA TGATGGAGGA AATGGAGGAG
TACGGCTGCG CGCGCCTGCC CGACAGCGGC GTGACCATGC TCGGCCCATT GTTGATCCGC
TATGGCGACG AGGCGCAACG GGCGCGCTTT CTGCCGCGCA TTCTCAGCGG CGAAGACATC
TGGTGCCAGG GCTACAGCGA GCCCAACGCC GGCTCCGACC TGGCCAGCCT GCGCACCGAG
GCGCGCCTGG AAAACGGCGA GTGGGTGATC AACGGACAGA AGACCTGGAC CACCATGGGC
TCTGAGGCCA ATTGGATCTT CCTGCTGGTC CGCACCGAGC GCAGCGCCAA GGCGCAGCAC
GGCATCAGCT TCCTGCTGGT GCCGATGGAC AGCCCGGGCA TCGAGGTGCG GCCGATCCTC
AACCTGGAGC TGCACGGCGA GTTCTGCGAA GTGTTTTTCA ACGACGTGCG GGTGCCCTAC
GACAGCCTGG TCGGCGAAAT CAACCAGGGC TGGAGCATGG CCAAGGCGCT GCTCGGTTTC
GAGCGGATCT TCCTCGGTTC GCCCAAGCAG TCCACCTTCG CCCTCCAGCG CCTGGAGCGC
CTGGCCCGGC ACCTGGGACT GTGGCACGAC CCTCTGTTCG CGCGCCGTTT CGCCGCGCTG
AGCATGGACC TGGACAGCCA CAAGGCGCTC TACGAGCGTT TCGCCGAACG CCTGCGGCGT
GGGGAGAGGC TCGGCCCGGA GGTATCCATG CTGAAGATCT TCCAGTCCGA ACTGTTCCAG
CGCATCAGCG AGCTGGGCCT GGAGGTCGCC GGGGAGGACT CGGCCCTGCT ACAGCCCTTC
GCCGAAGACC CCGAGCTGCA TCCGGCGGGG ATCTTCATCC AGTCGCGGCC GACCACCATC
TACGGCGGCA GCAACGAAAT CCAGCGCAAC ATCCTGGCCA AGAGCGTCCT CGGCCTGCCG
GGCTGA
|
|---|
| Protein sequence | MTDYDNLDDN AFRLMVREWI AANYPQRIRN PPRRLGREET REWYLLLSRQ GWLCPGWPRE
YGGMGLSAGK QLIMMEEMEE YGCARLPDSG VTMLGPLLIR YGDEAQRARF LPRILSGEDI
WCQGYSEPNA GSDLASLRTE ARLENGEWVI NGQKTWTTMG SEANWIFLLV RTERSAKAQH
GISFLLVPMD SPGIEVRPIL NLELHGEFCE VFFNDVRVPY DSLVGEINQG WSMAKALLGF
ERIFLGSPKQ STFALQRLER LARHLGLWHD PLFARRFAAL SMDLDSHKAL YERFAERLRR
GERLGPEVSM LKIFQSELFQ RISELGLEVA GEDSALLQPF AEDPELHPAG IFIQSRPTTI
YGGSNEIQRN ILAKSVLGLP G
|
|---|
| |