Gene PA14_50920 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_50920 
Symbol 
ID4385939 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp4524465 
End bp4525085 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content65% 
IMG OID639326668 
Producthypothetical protein 
Protein accessionYP_792233 
Protein GI116048965 
COG category[S] Function unknown 
COG ID[COG2860] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.0000428082 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTGCTGA CCGTGCTCTA CATCATCGCC ATCACCGCCG AAGCCATGAC CGGCGCGCTG 
TCGGCCGGCC GGCGCAGCAT GGACCTGTTC GGCGTGGTGC TGATCGCCTG CGTCACCGCC
CTGGGCGGCG GCTCGGTACG CGACATGCTG CTGGGCCATT ACCCGCTGAC CTGGGTCCGT
CACCCGGAAT ACCTGGCGCT GACCGCAGTC GCCGCGCTGG TCACGGTGTT CATCGCGCCG
CTGATGCGCC ACCTGCGCTC GCTGTTCCTG GTACTCGACG CGGTCGGCCT GGTGGCCTTC
ACCCTGATCG GCTGCCAGGT CAGCCTGGAA ATGGGCCACA GCCTGCTGAT CGCGGCGATC
AGCGGGGTGA TCACCGGGGT GTTCGGCGGC ATTCTCCGCG ACATCCTGTG CAACGACGTA
CCCTTGATCT TCCGCCGCGA ACTCTATGCC AGCGTGTCCT TCGCCAGCGC CTGGTGCTAC
CTGATCTGCG TGGAGCTGGA ACTGCCCTCC GAGCAGGCGA TGCTGATCAC CCTGTTCAGC
GGCTTCCTGT TCCGCCTGCT GGCCATCCGC TTCCACTGGG AAATGCCCAA GTTCGTCTAC
CAGGACGATT TCGACCACTG A
 
Protein sequence
MLLTVLYIIA ITAEAMTGAL SAGRRSMDLF GVVLIACVTA LGGGSVRDML LGHYPLTWVR 
HPEYLALTAV AALVTVFIAP LMRHLRSLFL VLDAVGLVAF TLIGCQVSLE MGHSLLIAAI
SGVITGVFGG ILRDILCNDV PLIFRRELYA SVSFASAWCY LICVELELPS EQAMLITLFS
GFLFRLLAIR FHWEMPKFVY QDDFDH