Gene PA14_49480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_49480 
Symbol 
ID4381684 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp4399221 
End bp4401008 
Gene Length1788 bp 
Protein Length595 aa 
Translation table11 
GC content40% 
IMG OID639326547 
Producthypothetical protein 
Protein accessionYP_792112 
Protein GI116049086 
COG category[R] General function prediction only 
COG ID[COG1106] Predicted ATPases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000071972 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAATAA CTAAACTAAC CCTCCATCGC TTTAAAAAAT ACAGAGATAA AGAAATATCA 
ATAAAACCCG GACTATCACT TTTTGCCGGA CCTAATAACG CAGGGAAAAC CACCATATTA
CAAGCTTTCG CAGTTTGGGA ATTCTGCAAA ACTGTACTTG AGATGGAGAA AGGCAGCGCT
AGCATTCGGC AAGGTTACGC TGGTCAAGGC CTAGGAATGG GAGCAGATGA TTTCCTAGTC
ATTAACACAC CGTCTCTTAA ACACCTATGG ACAAATCTTA ACACTCAAAG AGACAGTGAA
AATGATGGGT ACACTCTATG GATAAAAGTT GACTGGACTG ATAGGGACAA CGCAAAGCAT
TTAACAATAG GCCTATCACT CGCAAATGAT AGAATATTTA TAAAAACAAT ATCAAGCAAC
ATTCAGGAAG ATGAAAAATC ACCAAACATT GCTTATATAC CACCTTTTGC AGGCATAACA
ACAAAGGAAC AAAAAGCGAC ACCTGCCCAA CAGAGAAGAC TGATAGGACA AGGGCTACCC
GGCGCAACCA TTAGATCAAC TCTTCTCAAT CTATTTAATA CCAACCAAGC AAAGAGAGCA
GCCTTTAAAG ACAATCGCGG CAGAATTCCT AGGCACCAAT TACGAGAGAT TAGGGATTCG
GACCCATGGG AGATCCTCTC CACAATAATA AAAGAAGTAT TCAAAACAGA GATTACAGTA
AGCCCATACA ATGAGGCATA CCACACCTAT ATAAAGCTCA CAACTTACAA GGGAGACTTC
AATGAACGAG GACTATTTAC TCGATACTCA AATTATACCC CTAGAGATCT AACTGCGGAA
GGAAGTGGCT TTCTACAGTG GCTAAGTGTA TTTGCTTTTG CGCTTTCCCC AGAAACCGAC
TTGATACTTC TTGACGAACC AGACGCTCAC TTACACTCCA CTCTTCAGCA TGAAATAATA
AGACAACTTG AGAAAGTAGC AGAAAAAGCA GGAAAGCAGA TATTTTTCTG CACTCACTCT
CCAGAGCTAA TAAAGGCACA CCCTGCAGAA AAAATTCTTT CAATAAACAG AGACTCAATC
TCATATCTAT CTGACGACCA AGGGAAAATA ATATCACTAT CTGGCATAGG CAGCGAATAC
TACCCATTGT TAGACAACAC AAAAAAGACC AAAAAAATAC TATTTGTAGA AAATCTATCT
GACGCAAGAA CAATATTCAA TATCGCAAGA AAACTTGGCT TCAACATTGA AAACAAAATC
GTTATATGGC CTTGGGCTTC TAAAGGTCAT GAGCGCAAGC ATTTATTCAA CCAACTCCTC
CTTGAAATCC CTGAGTTAAA AGGGATAAGC CTAAACGACA GAGACAATGA AGAGATAAAC
ACTGTAATAG CCGAAAACCT TCGGGATACT ACATATCCCA CACCAAATGC GCAGACTAGA
CTTTACTTCA AAAAATGGCG AAGAAGATAC ATTGAAGGCT ACTTCCTTCA CCCCGACCCA
ATAGCAAGGG CAGCCAATCG ACCAGCAGAC GAAGTAATAA GACACGTATT AGATAACTTT
GCAATCAACA TTGCGGGCCG GATAGTAACT CAACAAAACG AGCCTGCAGC GCTCCTCGAC
TGCCGTGCAA AATCAATATT ATCCGAAGAC ACAAATAGCA TCCAAAGCGT CTTCCAAGTT
GACAAATACA AAATAGTAAA TGAATTATTA CCAAACGAAA TACACGAAGA TTTCCATATA
TTAATTAGAG AAATCTTACA GTTACTACAA ATTAATGAAC AAGCTTAA
 
Protein sequence
MQITKLTLHR FKKYRDKEIS IKPGLSLFAG PNNAGKTTIL QAFAVWEFCK TVLEMEKGSA 
SIRQGYAGQG LGMGADDFLV INTPSLKHLW TNLNTQRDSE NDGYTLWIKV DWTDRDNAKH
LTIGLSLAND RIFIKTISSN IQEDEKSPNI AYIPPFAGIT TKEQKATPAQ QRRLIGQGLP
GATIRSTLLN LFNTNQAKRA AFKDNRGRIP RHQLREIRDS DPWEILSTII KEVFKTEITV
SPYNEAYHTY IKLTTYKGDF NERGLFTRYS NYTPRDLTAE GSGFLQWLSV FAFALSPETD
LILLDEPDAH LHSTLQHEII RQLEKVAEKA GKQIFFCTHS PELIKAHPAE KILSINRDSI
SYLSDDQGKI ISLSGIGSEY YPLLDNTKKT KKILFVENLS DARTIFNIAR KLGFNIENKI
VIWPWASKGH ERKHLFNQLL LEIPELKGIS LNDRDNEEIN TVIAENLRDT TYPTPNAQTR
LYFKKWRRRY IEGYFLHPDP IARAANRPAD EVIRHVLDNF AINIAGRIVT QQNEPAALLD
CRAKSILSED TNSIQSVFQV DKYKIVNELL PNEIHEDFHI LIREILQLLQ INEQA