Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_49440 |
Symbol | |
ID | 4381687 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 4393260 |
End bp | 4393970 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639326544 |
Product | two-component response regulator |
Protein accession | YP_792109 |
Protein GI | 116049089 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.000000474992 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 0.747521 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGAGCAAG AAGCCTGGCG CATCCTGATC GTCGAGGACG ATCGACGCCT GGCCGAGCTG ACCCGGGAAT ACCTGGAAGG CAACGGCCTG AAGGTCGACA TCGAAGCCAA CGGCGCACTG GCGGCGGCGC GTATCCTCGC CGAACGCCCG GACCTGGTGG TGCTCGACCT GATGCTGCCG GGCGAGGACG GCCTGTCCAT CTGCCGCCAG GTGCGTCCGC AGTTCGACGG TCCGATCCTG ATGCTCACCG CGCGCACCGA CGACATGGAC GAGGTGCTCG GCCTGGAGAT GGGCGCCGAC GACTACGTGT GCAAGCCGGT GCGCCCGCGT GTGCTGCTGG CGCGCATCCG TGCCCTGTTG CGGCGCAGCG AGGCGCCGGA AGCGGGCGCC CCGGCGGCGG ACAGCAAACG CCTGGCGTTC GGTCGCCTGG TGATCGACAA CGCGATGCGC GAGGCCTGGC TGGACGGGAC CACCATCGAG CTGACCAGCG CCGAATTCGA CCTGCTCTGG CTGCTGGCGG CGAACGCCGG GCGGATTCTC TCCCGCGAGG AGATCTTCAA CGCCCTGCGC GGCATCGAGT ACGACGGCCA GGACCGCTCC ATCGACGTGC GCATCTCGCG GATCCGCCCG AAGATCGGCG ATGACCCGAT GCACCCGCGG CTGATCAAGA CCGTGCGCAG CAAGGGCTAC CTGTTCGTCG GAGAGGGCTG A
|
Protein sequence | MEQEAWRILI VEDDRRLAEL TREYLEGNGL KVDIEANGAL AAARILAERP DLVVLDLMLP GEDGLSICRQ VRPQFDGPIL MLTARTDDMD EVLGLEMGAD DYVCKPVRPR VLLARIRALL RRSEAPEAGA PAADSKRLAF GRLVIDNAMR EAWLDGTTIE LTSAEFDLLW LLAANAGRIL SREEIFNALR GIEYDGQDRS IDVRISRIRP KIGDDPMHPR LIKTVRSKGY LFVGEG
|
| |