Gene PA14_49420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_49420 
Symbol 
ID4381688 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp4391560 
End bp4392918 
Gene Length1359 bp 
Protein Length452 aa 
Translation table11 
GC content69% 
IMG OID639326543 
Producttwo-component sensor 
Protein accessionYP_792108 
Protein GI116049090 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0003153 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value0.529806 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGGAC GCAGCCGCGC GCGTCTGATG AACGGCCAGG TGCTGGTGAA GCAGACCGCC 
GAGCACGCCG TCACCGTCTA TACCCAGGCC AGCGCCGCCG AGAACCTGGT GCTCAGCGGC
GAGGTGCAGC AGGTCAGCGA GCAACTGGCG CGGGCCACGG TTTACCTGCT GATGGACGAA
CTGGTGCGCT ACCCGGCCAG CGAACAGCCT TACCACCTGG CGCGGATCGT CCGCGACAAG
CGCTTCGGCT TCCCGGTGCA TCTGCTCCAG GTCAAGGAGC TGGACCTCGA CGACGACCAG
CGCCGGCGGG TGGTGGAGGG CGACACGGTG ATGGCGCTGG GCAAGGACGG CGACTCGATC
CGCATCTTCG CCGGCATCCT CGACACGCCC TGGGTGCTGG AGCTGGGCCC GCTGTTCCAG
ATGAACCTCT ATCCGCCGCA GCTGCTGTTG CTGCTCGGCG CGCTGTGCCT GAGCTTCATC
GGCCTGATCA CCTACCTGCT GGTGCGTCGT CTGGAGCAGC GCCTGCGCAG CCTGGAGGCG
GCCGCCACGC GGATCGCCCG CGGCAGTCTG GATACCCGCG TCGAGGTGCG CGGCGGCGAC
TCGGTGGGAC GCCTGGGCGC GGCCTTCAAC CATATGGCCG AGCACATCCA CCGGCTGCTG
ACGGTGCAGC GCGAGATGGT TCGCGCGGTG TCCCACGAGC TGCGCACGCC GGTGGCGCGG
TTGCGCTTCG GCCTGGAGAT GATCGAGACC GCCGAGACCG ACGGCGCCCG CCTGAAGTAC
CTGGAGGGCA TGGACAACGA TATCCAGGAC CTCGACAAGC TGGTCGACGA GATGCTCACC
TACGCGCGCT TGGAACAGGG CTCGCCGCCG CTGACCTACC AGCGCCTGGA GCTGGGCGTG
CTGGTGCGCC AGGTGGTGGA GGAGATCGCT CCGCTGCGCC GCGAGGTGCT GGTCAGTTGC
GAGGAGGGCG CGCTGGTGCC TGAGGAGCTG GGCAGTTGGA TCGAGGCCGA GCCGCGCTAC
CTGCATCGGG CCTTGCAGAA CCTGCTGACC AATGCGCTGC GGCATGCCGA TCGTCGGGTC
AGGATCAGCT ACCGGGTCAG CCTGGAGCGT TGCCGGGTGG ATGTCGAGGA CGACGGGCCG
GGGGTGCCGG AGGCGCAATG GGAGCGGCTC TTTACGCCAT TCCTACGCCT GGACGACAGC
CGGACCCGTG CTTCCGGCGG GCATGGCCTG GGACTGTCCA TCGTCCGGCG GATCGTCTAC
TGGCATGGCG GCCGGGCCTC CATCGGCCGC AGCGAGACTC TGGGCGGTGC CTGCTTCACC
CTGGCCTGGC CGCGCAAGGC AGGTCTGCGC GACCGCTGA
 
Protein sequence
MDGRSRARLM NGQVLVKQTA EHAVTVYTQA SAAENLVLSG EVQQVSEQLA RATVYLLMDE 
LVRYPASEQP YHLARIVRDK RFGFPVHLLQ VKELDLDDDQ RRRVVEGDTV MALGKDGDSI
RIFAGILDTP WVLELGPLFQ MNLYPPQLLL LLGALCLSFI GLITYLLVRR LEQRLRSLEA
AATRIARGSL DTRVEVRGGD SVGRLGAAFN HMAEHIHRLL TVQREMVRAV SHELRTPVAR
LRFGLEMIET AETDGARLKY LEGMDNDIQD LDKLVDEMLT YARLEQGSPP LTYQRLELGV
LVRQVVEEIA PLRREVLVSC EEGALVPEEL GSWIEAEPRY LHRALQNLLT NALRHADRRV
RISYRVSLER CRVDVEDDGP GVPEAQWERL FTPFLRLDDS RTRASGGHGL GLSIVRRIVY
WHGGRASIGR SETLGGACFT LAWPRKAGLR DR