| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_49380 |
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| Symbol | dapE |
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| ID | 4381692 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | + |
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| Start bp | 4388570 |
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| End bp | 4389721 |
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| Gene Length | 1152 bp |
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| Protein Length | 383 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639326539 |
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| Product | succinyl-diaminopimelate desuccinylase |
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| Protein accession | YP_792104 |
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| Protein GI | 116049094 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01246] succinyl-diaminopimelate desuccinylase, proteobacterial clade |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.545113 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 0.68412 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCCT CTTCGCCGAG TCTCTCGCCG ACCCTCGAAC TCGCCTGCGA GTTGATCCGC
CGCCCCTCCG TCACGCCCCT CGACGCCGAC TGCCAGGCCC TGATGATGCG CCGCCTGGAA
GCCGCCGGCT TCGCCCTGGA GCCGATGCGC ATTGAGGAGG TGGACAACTT CTGGGCACGG
CGCGGCGGCG ACGGCCCGGT GCTGTGCTTC GCCGGGCACA CCGACGTGGT CCCCACCGGC
CCGCTGCAGG CCTGGCAGCA CCAACCCTTC GACGCCCTGA TCGACGACCA GGGCATGCTC
TGCGGACGCG GCGCGGCGGA CATGAAAGGC AGCCTGGCGT CGATGATCGT CGCCGTCGAG
CGCTTCGTCG CCGACCACCC GAAGCACAAG GGCGCCATCG CCTTCCTCAT CACCAGCGAC
GAGGAAGGCC CGGCCCACCA CGGCACCAAG GCGGTGGTCG AACGCCTCGC CGCACGCGGC
GAGCGCCTGG ACTGGTGCAT CGTCGGCGAA CCGTCGAGCA CCAGCCTGGT CGGCGACGTG
GTGAAGAACG GCCGCCGCGG CTCCCTTGGC GCCAAGCTGA CCATCCGCGG CGTACAGGGC
CATGTGGCCT ACCCGCACCT GGCGAAGAAC CCGATCCACC TGGCCGCCCC GGCGCTGGCC
GAACTGGCGG CGGAACACTG GGACGACGGC AATGCCTTCT TCCCGCCGAC CAGCTTCCAG
GTTTCCAACC TGAACTCCGG CACCGGCGCC ACCAACGTCA TCCCCGGTGA ACTGACCGCG
CTGTTCAACT TCCGCTTCTC CACTGAATCC ACCGTCGAAG GCCTGCAGAA ACGCGTCGAG
GCGATCCTCG ACAAGCACGG CCTGGACTGG CACGTCGAAT GGGCGCTGTC CGGCCTGCCG
TTCCTCACCG AGCCGGGCGA ACTGCTCGAT GCGGTGGCCG CCAGCATCAG GGCGGTCACC
GGCCGCGAGG CCCGGCCCTC GACCAGCGGC GGCACCTCCG ACGGACGCTT CATCGCCACC
ATGGGCACCC AGGTGGTCGA ACTCGGCCCG GTCAACGCCA CCATCCACCA GGTCAACGAG
CGGGTCCTGG CCAGCGACCT GGAGCTGCTC ACCGAAATCT ACTACCAGAC CCTGGTGAGG
CTGCTCGCCT GA
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| Protein sequence | MTASSPSLSP TLELACELIR RPSVTPLDAD CQALMMRRLE AAGFALEPMR IEEVDNFWAR
RGGDGPVLCF AGHTDVVPTG PLQAWQHQPF DALIDDQGML CGRGAADMKG SLASMIVAVE
RFVADHPKHK GAIAFLITSD EEGPAHHGTK AVVERLAARG ERLDWCIVGE PSSTSLVGDV
VKNGRRGSLG AKLTIRGVQG HVAYPHLAKN PIHLAAPALA ELAAEHWDDG NAFFPPTSFQ
VSNLNSGTGA TNVIPGELTA LFNFRFSTES TVEGLQKRVE AILDKHGLDW HVEWALSGLP
FLTEPGELLD AVAASIRAVT GREARPSTSG GTSDGRFIAT MGTQVVELGP VNATIHQVNE
RVLASDLELL TEIYYQTLVR LLA
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