Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_49180 |
Symbol | phoP |
ID | 4380127 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 4370648 |
End bp | 4371325 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639326522 |
Product | two-component response regulator PhoP |
Protein accession | YP_792087 |
Protein GI | 116049111 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 49 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.000831037 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAAACTGC TGGTAGTGGA AGACGAGGCG CTGTTGCGCC ACCACCTCTA TACCCGCCTG GGTGAACAGG GGCACGTGGT GGACGCGGTA CCGGATGCCG AGGAAGCCCT CTACCGGGTC AGCGAATACC ACCACGACCT GGCGGTGATC GACCTCGGCC TGCCGGGCAT GAGCGGCCTG GACCTGATCC GCGAGCTGCG TTCGCAGGGC AAGTCCTTCC CGATCCTGAT CCTCACTGCC CGCGGCAACT GGCAGGACAA GGTCGAAGGC CTGGCCGCCG GGGCCGACGA CTACGTGGTC AAGCCGTTCC AGTTCGAGGA ACTGGAAGCG CGCCTGAACG CGCTGCTGCG ACGCTCCTCG GGGTTCGTCC AGTCGACCAT CGAGGCCGGC CCCCTGGTCC TCGACCTGAA CCGCAAGCAG GCGCTGGTCG AGGAGCAACC GGTGGCGCTG ACCGCCTACG AATACCGCAT CCTCGAATAC CTCATGCGGC ATCACCAGCA GGTGGTGGCC AAGGAACGCC TGATGGAACA GCTCTATCCC GACGACGAGG AGCGCGACGC CAACGTCATC GAGGTGCTGG TCGGCCGCCT GCGGCGCAAG CTGGAGGCCT GCGGCGGCTT CAAGCCGATC GATACGGTGC GCGGCCAGGG CTACCTGTTC ACCGAGCGCT GCCGGTGA
|
Protein sequence | MKLLVVEDEA LLRHHLYTRL GEQGHVVDAV PDAEEALYRV SEYHHDLAVI DLGLPGMSGL DLIRELRSQG KSFPILILTA RGNWQDKVEG LAAGADDYVV KPFQFEELEA RLNALLRRSS GFVQSTIEAG PLVLDLNRKQ ALVEEQPVAL TAYEYRILEY LMRHHQQVVA KERLMEQLYP DDEERDANVI EVLVGRLRRK LEACGGFKPI DTVRGQGYLF TERCR
|
| |