Gene PA14_49180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_49180 
SymbolphoP 
ID4380127 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp4370648 
End bp4371325 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content66% 
IMG OID639326522 
Producttwo-component response regulator PhoP 
Protein accessionYP_792087 
Protein GI116049111 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones49 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.000831037 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAACTGC TGGTAGTGGA AGACGAGGCG CTGTTGCGCC ACCACCTCTA TACCCGCCTG 
GGTGAACAGG GGCACGTGGT GGACGCGGTA CCGGATGCCG AGGAAGCCCT CTACCGGGTC
AGCGAATACC ACCACGACCT GGCGGTGATC GACCTCGGCC TGCCGGGCAT GAGCGGCCTG
GACCTGATCC GCGAGCTGCG TTCGCAGGGC AAGTCCTTCC CGATCCTGAT CCTCACTGCC
CGCGGCAACT GGCAGGACAA GGTCGAAGGC CTGGCCGCCG GGGCCGACGA CTACGTGGTC
AAGCCGTTCC AGTTCGAGGA ACTGGAAGCG CGCCTGAACG CGCTGCTGCG ACGCTCCTCG
GGGTTCGTCC AGTCGACCAT CGAGGCCGGC CCCCTGGTCC TCGACCTGAA CCGCAAGCAG
GCGCTGGTCG AGGAGCAACC GGTGGCGCTG ACCGCCTACG AATACCGCAT CCTCGAATAC
CTCATGCGGC ATCACCAGCA GGTGGTGGCC AAGGAACGCC TGATGGAACA GCTCTATCCC
GACGACGAGG AGCGCGACGC CAACGTCATC GAGGTGCTGG TCGGCCGCCT GCGGCGCAAG
CTGGAGGCCT GCGGCGGCTT CAAGCCGATC GATACGGTGC GCGGCCAGGG CTACCTGTTC
ACCGAGCGCT GCCGGTGA
 
Protein sequence
MKLLVVEDEA LLRHHLYTRL GEQGHVVDAV PDAEEALYRV SEYHHDLAVI DLGLPGMSGL 
DLIRELRSQG KSFPILILTA RGNWQDKVEG LAAGADDYVV KPFQFEELEA RLNALLRRSS
GFVQSTIEAG PLVLDLNRKQ ALVEEQPVAL TAYEYRILEY LMRHHQQVVA KERLMEQLYP
DDEERDANVI EVLVGRLRRK LEACGGFKPI DTVRGQGYLF TERCR