| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_49130 |
|---|
| Symbol | dctA |
|---|
| ID | 4380131 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | - |
|---|
| Start bp | 4363190 |
|---|
| End bp | 4364500 |
|---|
| Gene Length | 1311 bp |
|---|
| Protein Length | 436 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639326518 |
|---|
| Product | C4-dicarboxylate transporter DctA |
|---|
| Protein accession | YP_792083 |
|---|
| Protein GI | 116049115 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1301] Na+/H+-dicarboxylate symporters |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 51 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.0000308919 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACCAAAC AACCCTTCTA CAAGAGCCTG TACGTGCAGG TTCTGGTCGC CATCGCCATC
GGTATCGCGC TCGGCCACTG GTACCCGGAA ACGGCGGTGG CGATGAAGCC GTTCGGCGAC
GGCTTCGTCA AACTGATCAA GATGGCCATC GCGCCGATCA TCTTCTGCAC CGTGGTCACC
GGCATCGCCG GCATGCAGAG CATGAAGTCG GTCGGCAAGA CCGGCGGCAT GGCGCTGCTG
TACTTCGAGG TCGTCTCCAC CGTGGCCCTG ATCATCGGCC TGGTAGTGGT CAACGTGGTC
CAGCCGGGCG CCGGCATGCA CGTAGACCCG AACACCCTCG ACACCAGCAA GATCGCTGCC
TACGCCGCTG CCGGCGAGAA GCAGAGCACT GTCGACTTCC TGATGAACGT GATCCCCGGC
ACCGTGGTCG GCGCGTTCGC CAACGGCGAC ATCCTCCAGG TCCTGTTCTT CTCCGTGCTC
TTCGGCTACG CCCTGCATCG CCTGGGCAGC TACGGCAAGC CGGTGTTCGA GTTCATCGAG
CGCGTCTCCC ACGTGATGTT CAACATCATC AACGTGATCA TGAAGGTCGC CCCGATCGGC
GCGTTCGGCG CCATGGCCTT CACCATCGGC GCCTACGGTG TGGGTTCGCT GGTGCAGCTC
GGCCAGCTGA TGCTGTGCTT CTACATCACC TGCATCCTGT TCGTGCTCAT CGTCCTCGGC
GGCATCGCCC GCGCCCACGG CTTCAGCATC CTGCGCTTCA TCAGGTACAT CCGCGAGGAA
CTGCTGATCG TGCTGGGCAC CTCGTCTTCC GAGTCGGCTC TGCCGCGGAT GATCGACAAG
ATGGAGAAGC TCGGCTGCAA CAAGTCGGTG GTCGGCCTGG TGATTCCCAC CGGTTACTCC
TTCAACCTCG ACGGCACCTC GATCTACCTG ACCATGGCCG CGGTGTTCAT CGCCCAGGCC
ACCGATACGC CGATGGACAT CACCCACCAG ATCACCCTGC TGCTGGTGCT GCTGATCGCT
TCCAAGGGCG CCGCCGGCGT CACCGGCAGC GGCTTCATCG TGCTCGCCGC GACCCTTTCC
GCCGTCGGCC ACCTGCCGGT CGCCGGCTTG GCGCTGATCC TCGGCATCGA CCGCTTCATG
TCCGAAGCCC GCGCGCTGAC CAACCTGGTC GGCAACGGCG TGGCCACGGT AGTGGTTTCC
AAGTGGTGCA AGCAGCTCGA CGAGGGCACC TTGCAGCGCG AACTGGCCGG CGAGGGCAAC
GCTTCGTCGC CTGCCAGCGA TATTCCGGTG GGCGGCCGCG AAGCGGTCTA A
|
|---|
| Protein sequence | MTKQPFYKSL YVQVLVAIAI GIALGHWYPE TAVAMKPFGD GFVKLIKMAI APIIFCTVVT
GIAGMQSMKS VGKTGGMALL YFEVVSTVAL IIGLVVVNVV QPGAGMHVDP NTLDTSKIAA
YAAAGEKQST VDFLMNVIPG TVVGAFANGD ILQVLFFSVL FGYALHRLGS YGKPVFEFIE
RVSHVMFNII NVIMKVAPIG AFGAMAFTIG AYGVGSLVQL GQLMLCFYIT CILFVLIVLG
GIARAHGFSI LRFIRYIREE LLIVLGTSSS ESALPRMIDK MEKLGCNKSV VGLVIPTGYS
FNLDGTSIYL TMAAVFIAQA TDTPMDITHQ ITLLLVLLIA SKGAAGVTGS GFIVLAATLS
AVGHLPVAGL ALILGIDRFM SEARALTNLV GNGVATVVVS KWCKQLDEGT LQRELAGEGN
ASSPASDIPV GGREAV
|
|---|
| |