| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_48730 |
|---|
| Symbol | |
|---|
| ID | 4380149 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | - |
|---|
| Start bp | 4332925 |
|---|
| End bp | 4333872 |
|---|
| Gene Length | 948 bp |
|---|
| Protein Length | 315 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639326480 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_792045 |
|---|
| Protein GI | 116049153 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1741] Pirin-related protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 45 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.000159869 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAATA CCGAAGAGCG TTGCGACCTG TCCTCCTCGC GGGACTGTCC GGAGCGCCGC
GAACACCTGC TGCAACGAGT CACCGCGCGC GCCGCGGAAA TCGGCGGCGG GATCACCGTC
AGTCGGCTGA TGCCGTCGCG CCAGCGGCGG ATGATCGGCG CCTGGTGCTT CCTCGACCAT
GCCGGTCCCG CCGAATTCGA ACCCGGCGGC GGCCTGGCCG TGGGCCCGCA CCCGCACATC
GGCCTGCAGA CCTTTACCTG GATGATCCAG GGCGAGGCGT TGCACCGCGA CAGCCTGGGC
AACGTCCAGG TGATCCGTCC GGGCCAGGTC AACCTGATGA CCGCCGGCCA TGGCATCGCC
CACACCGAGG AGTCGCTGCC CGACGAGCGC CACGCCCACG CCGCGCAGTT GTGGATCGCG
CTGCCCTACG AGCAGCGCGA CATCGCCCCG GCCTTCGACC ATCATCCCGA CCTGCCGCGC
TGGCAGGAGC AGGGGGTCAC CTTCACCCTG CTGGCCGGCG CTCTGGACGG GCGGCAGGCG
CCGTGCCGGC TTTACTCGCC GCTGCTCGGC GCCGACCTGG CCTGCGACGA TGCCTCGACC
CTGCAACTGA CGCTCGACCC GCACTTCGAG TACGGCCTGC TGCCGCTGGA AGGCGGGTTG
GAAGTGGGCG GCGAGCATTT CGCGGTGAAC GAACTGGCCT ACCTGGGCGA CGGCCGCGAC
GGCCTGCAAC TGCAACTCGA TCCTGGCGCG CGGGTGCTGT TGCTGGGCGG CGCACCGTTC
GGCGCGGAGA TCTTCATGTG GTGGAACTTC GTCGGCCACA GCAAGGGTGA GATCGCCCGG
GCGCAGAAGG CCTGGGAGGA GGGGGATGCC CGCTTCGGCC GGCTCGACGC CCTGGAAGGG
CCGCGCTTGA GCGCTCCGCC GATTCCCTGG AAGATCGACG CCGAGTGA
|
|---|
| Protein sequence | MSNTEERCDL SSSRDCPERR EHLLQRVTAR AAEIGGGITV SRLMPSRQRR MIGAWCFLDH
AGPAEFEPGG GLAVGPHPHI GLQTFTWMIQ GEALHRDSLG NVQVIRPGQV NLMTAGHGIA
HTEESLPDER HAHAAQLWIA LPYEQRDIAP AFDHHPDLPR WQEQGVTFTL LAGALDGRQA
PCRLYSPLLG ADLACDDAST LQLTLDPHFE YGLLPLEGGL EVGGEHFAVN ELAYLGDGRD
GLQLQLDPGA RVLLLGGAPF GAEIFMWWNF VGHSKGEIAR AQKAWEEGDA RFGRLDALEG
PRLSAPPIPW KIDAE
|
|---|
| |