Gene PA14_46780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_46780 
Symbol 
ID4383066 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp4166742 
End bp4167155 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content65% 
IMG OID639326327 
Producthypothetical protein 
Protein accessionYP_791892 
Protein GI116049305 
COG category[S] Function unknown 
COG ID[COG2764] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.00435317 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.000000369567 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAAATCG TCCCCTACCT GATCTTCAAC GGTAATTGCC GGGAGGCCTT CAGCTGCTAC 
CACCAGCACC TGGGCGGCAC CCTGGAGGCC ATGCTGCCGT TCGGCGACAG CCCCGAGTGC
GGCGACATCC CGGCCGACTG GAAAGACAAG ATCATGCACG CACGGCTGGT GGTCGGCAGC
TTCGCCCTGA TGGCCTCGGA CAATCACCCG GCCTATCCCT ACGAAGGCAT CAAGGGCTGT
TCCATCAGCC TCAACGTCGA CAGCAAGGCC GAGGCCGAGC GCCTGTTCAA CGCCCTCGCC
GAGGGCGGCT CGGTCCAGAT GCCGCTGGGC CCGACCTTCT GGGCGGCGAG CTTCGGCATG
TTCACCGACC GCTTCGGCGT GGCCTGGATG GTCAACTGCG AGCAGGACCG GTAG
 
Protein sequence
MQIVPYLIFN GNCREAFSCY HQHLGGTLEA MLPFGDSPEC GDIPADWKDK IMHARLVVGS 
FALMASDNHP AYPYEGIKGC SISLNVDSKA EAERLFNALA EGGSVQMPLG PTFWAASFGM
FTDRFGVAWM VNCEQDR