| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_46680 |
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| Symbol | |
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| ID | 4382278 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | + |
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| Start bp | 4160669 |
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| End bp | 4162102 |
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| Gene Length | 1434 bp |
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| Protein Length | 477 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639326319 |
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| Product | putative transporter |
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| Protein accession | YP_791884 |
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| Protein GI | 116049313 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.013844 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0000129498 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGAACAGCC CCGCCCTGCC CCTTTCCCGT GGCTTGCGCA TCCGCGCCGA ACTCAAGGAA
CTGCTGACCC TCGCCGCGCC GATCATGATC GCGCAACTGG CGACCACCGC CATGGGCTTC
GTCGATGCGG TGATGGCCGG GCGCGCCAGT CCGCACGACC TGGCAGCGGT GGCGCTGGGC
AACTCGATCT GGATCCCGAT GTTCCTGCTG ATGACCGGCA CCCTGCTCGC CACCACGGCC
AAGGTCGCCC AGCGCTACGG CGCCGGCGAC CAGCCCGGCA CCGGGCCGCT GGTGCGCCAG
GCGCTGTGGC TGGCGCTGCT GATCGGACCG CTGTCGGGGG CGGTGCTGTG GTGGTTGTCG
GAGCCGATCC TCGGCTTGAT GAAAGTGCGC CCGGAACTGA TCGGGCCGAG CCTGCTGTAC
CTCAAGGGCA TCGCCCTGGG CTTCCCGGCG GCGGCGCTGT ACCACGTACT ACGCTGCTAC
ACCAACGGCC TGGGACGGAC CCGGCCGAGC ATGGTGCTGG GGATCGGCGG GCTGCTGCTG
AACATCCCGA TCAACTACGC GCTGATCTAC GGCCACTTCG GCATGCCGAA GATGGGCGGC
CCCGGCTGCG GCTGGGCCAC CGGCTCGGTG ATGTGGTTCA TGTTCCTCGG CATGCTGTTC
TGGGTGAACA AGGCCTCGAT CTACCGCGCC AGCCAGTTGT TCTCGCGCTG GGAGTGGCCG
GATCGCGCGA CCATCGGCCC GCTGGTGGCG GTCGGCCTGC CGATCGGCAT CGCGGTGTTC
GCCGAGTCGA GCATCTTCTC GGTGATCGCC CTGCTGATCG GCGGGCTCGA CGAGAACGTG
GTGGCCGGCC ACCAGATCGC CCTGAACTTC AGCGCGCTGG TGTTCATGAT TCCCTATTCG
CTGGGGATGG CGGTGACCGT GCGGGTCGGC CACAACCTCG GCGCCGGCCT GCCGCGCGAC
GCGCGCTTCG CCGCCGGCGT GGGGATGGCC GCGGCGCTGG GCTACGCCTG CGTCTCGGCG
AGCCTGATGC TGTTGCTGCG CGAGCAGATC GCCGCGATGT ATTCGCCGGA CCCGGCGGTG
ATCGCCATCG CCGCCTCGCT GATCGTGTTC TCCGCGCTGT TCCAGTTCTC CGACGCCCTG
CAGGTCACCG CCGCCGGGGC CCTGCGCGGC TACCAGGACA CCCGGGTGAC GATGATCATG
ACCCTGTTCG CCTACTGGGG CATCGGCCTG CCGGTGGGCT ACAGCCTCGG CCTCACCGAC
TGGTTCCAGG AACCCACCGG ACCGCGCGGC CTGTGGCAAG GCCTGGTGGT GGGCCTGACC
GGCGCGGCGA TCATGCTCTG CATCCGCCTG GCGCGCAGCG CGCGGCGCTT CATCCGCCAG
CACGAGCGCC TGCAGCGGGA GGACGCGGCG GCCGCCTCAG TCCTTGGCCG GTAG
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| Protein sequence | MNSPALPLSR GLRIRAELKE LLTLAAPIMI AQLATTAMGF VDAVMAGRAS PHDLAAVALG
NSIWIPMFLL MTGTLLATTA KVAQRYGAGD QPGTGPLVRQ ALWLALLIGP LSGAVLWWLS
EPILGLMKVR PELIGPSLLY LKGIALGFPA AALYHVLRCY TNGLGRTRPS MVLGIGGLLL
NIPINYALIY GHFGMPKMGG PGCGWATGSV MWFMFLGMLF WVNKASIYRA SQLFSRWEWP
DRATIGPLVA VGLPIGIAVF AESSIFSVIA LLIGGLDENV VAGHQIALNF SALVFMIPYS
LGMAVTVRVG HNLGAGLPRD ARFAAGVGMA AALGYACVSA SLMLLLREQI AAMYSPDPAV
IAIAASLIVF SALFQFSDAL QVTAAGALRG YQDTRVTMIM TLFAYWGIGL PVGYSLGLTD
WFQEPTGPRG LWQGLVVGLT GAAIMLCIRL ARSARRFIRQ HERLQREDAA AASVLGR
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