Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_46640 |
Symbol | |
ID | 4382282 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 4155789 |
End bp | 4158230 |
Gene Length | 2442 bp |
Protein Length | 813 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639326315 |
Product | siderophore receptor |
Protein accession | YP_791880 |
Protein GI | 116049317 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.010692 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.000000903307 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGCATTTTT CCCTCCGCAG TCGCCACCTG CGTCCTTCAT TGCTCGCCAG CAGCCTGCTC CTGGCGGTGT CGGCCCAGGG CCAGGAAAAG CTCGACGTGG ATCTGCCCGC CGCGCCGCTC GGCCAGGCGA TCAACGCCCT CGCGCAACAA TCCTCGGTAC AGATCCTTTT CGCCGGCGAT CTCGGCGCCG GCCGCCAGGC GCCCGCGCTG AAGGGGCGTT TCACCCCCGA AGAGGCATTG CGCCAGTTGC TCAGGGACAG CGGCCTGAAG GCGCAGGCCA GGGACGAACA TACCTTCATC GTCGTTCCGG CCAGCGAAGC CGCCGTGCCC GCTACGCAAG CCCGCAGCGA ACCGCTGGAC ATGGAGCAGA TGGAAATCAC CGCCTCGCGC ACCAGCAGCG ACCTGGTCTC CGCCACGCGC CAGTCCACCG TCATCGAGCA TGCCCAGCTG GAGGAGCTGC GCCAGGGCTC CGACAGCCTG GCCACCGTGC TGGCCAAGGC GGTGCCGGGG ATGTCCGATT CCAGCCGCAC CATCACCGAA TACGGCCAGA CCCTGCGCGG GCGCAGCATG CTGGTGATGG TCGATGGCGT GCCGCTGAAC ACCAATCGCG ACTCCTCGCG CAACCTGGCC AACATTGACC CGGCACTGAT CGAGCGGATC GAGGTGATCC GTGGCAGCAG CGCCATCTAC GGCAGCGGCG CCACCGGCGG GATCATCTCC ATCACCACGC GTCCGGCCGG CGGCGAGAAC CGCGCGGAAA CCCGCCTCAG CGCCACCTCG CCGCTGACCC GGCTGGGCAG CGATGGCCTC GGCGGCCAGT TCCAGCAATA CTTCGCCGGC TCCCTGGGGG CGCTCGACTA TTCGTTCGAC TTCGGCACCC GCCACGTCGG CGCTTCCTAC GACGCCCATG GCGACCGCAT CGCCCCGGAA CCCAGCCAGG GCGACCTGTT CGACTCGAAC GTCTACAACA TCGGCGGCAA GCTCGGCCTG CGCATCGACG AGAACCAGCG CGTGCAGCTC GCCCTCAGCC ACTACGACGC CCGCCAGGAC ACCGACTACG CCACCGACCC GAGGGTCGCC AGGCTGCCGC CGGGCTCGGT CCCGGCCAAC GCGATCAAGG GCCTGGAGCT GGACGAGCAG AACCGCATCC GCAACACCCT GGCGAACCTC GAGTACGAGA ACCTCGACAT CCTCGGCAGC CGGCTCTCCG CGCAGCTCTA CTACCGCGAC TACTTCACCC GCTTCACCCC GTTCGACGCC CGCGCCGTCT CCACCCGCGG CGGCAACGTC GACCAGATCA TGCAGAACAG CGAAGTGTTC GGCAGCCGCC TGACCCTGCG CACGCCGCTG GGCGAAAGCG GCAATACCGA ACTGGTCTGG GGCGGCGACT ACAACCAGGA ACGCAGCGAC ATGCCGCTCG ACGTGTTCGA CCCGGCGGCC TACGACGCCA GCGGCGGGCT GGTCTTCGAC AAGATCGGCA AGCTCACCTA CATGCCGCCG CTACGCACCC GCAGCGCCGG CGCGTTCGCC CAGTTGCAGC ATCGCTTCGA CGAACACTGG TCGATCGACG GCGGCCTGCG CTACGAATAC TCCACCGCCG AATTCGACGA CTTCATCCCG CTCTCCGAGT CCAAGGCCGC CTCGCCGGTG ACCGTCAAGG GCGGCGACCT CGACTACGAC GCGGTGCTGT CGAACCTCGG CATCGTCTAT TCGCCGGTGG CTGGCCAGGA AATCTATGCC TCCTTCAGCC AGGGCTTCCA GCTGCCCGAC GTCGGCATCC AGCTGCGCAA CGCCCGCCGT GGCTTCGATA TCGGCTCCTC GAACCTCGAA CCGGTGAAGA CCAACAACTA CGAACTCGGC TGGCGCGGCG CCATCGGCGG CAACACCCTG GGCAGCCTGG CGCTGTTCTA CACCACCTCC AAGCTGGGCG ACGTGCAGAG CTTCAACAAC GGCCTGATCC TCACCCGCAC CAAGGAGCGC ATCTACGGCG TCGAGGCCAG CGCCGACTGG CTCAGCGACG ACGAAGTCTG GGGCGCGGGC GGCAGCGCCA CCTGGATGCG CGGACGCGAG AAGCCGGACG GCAAGGACTG GCAGGACATG ACCGGCTACC GCGTGCCGCC GCTGAAGCTG ACCGCCTACC TGCAATACAA GCCGGATGCC GACTGGAACA ACCGCCTGCA GGCCACCTTC TTCGACTCCA AGGACTACCG TCTCGACGGC GTGGAAAGCT TCGGCCGGCG CCAGGTCAGC ACCTACACCA CGGTCGACCT GGTCAGCCAG TACCGCATCA CCCCCGACGA CCAGTTGAGC CTGGGCATCC AGAACCTGTT CAACCGCGAC TACTACCCGC TCTACAGCCA GTTGCTGCGC AACAACAACA ACACCAGCCA CCTGCCGGCG CCGGGCACGG TGCTGACGGC GAGCTATACG CACAACTGGT GA
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Protein sequence | MHFSLRSRHL RPSLLASSLL LAVSAQGQEK LDVDLPAAPL GQAINALAQQ SSVQILFAGD LGAGRQAPAL KGRFTPEEAL RQLLRDSGLK AQARDEHTFI VVPASEAAVP ATQARSEPLD MEQMEITASR TSSDLVSATR QSTVIEHAQL EELRQGSDSL ATVLAKAVPG MSDSSRTITE YGQTLRGRSM LVMVDGVPLN TNRDSSRNLA NIDPALIERI EVIRGSSAIY GSGATGGIIS ITTRPAGGEN RAETRLSATS PLTRLGSDGL GGQFQQYFAG SLGALDYSFD FGTRHVGASY DAHGDRIAPE PSQGDLFDSN VYNIGGKLGL RIDENQRVQL ALSHYDARQD TDYATDPRVA RLPPGSVPAN AIKGLELDEQ NRIRNTLANL EYENLDILGS RLSAQLYYRD YFTRFTPFDA RAVSTRGGNV DQIMQNSEVF GSRLTLRTPL GESGNTELVW GGDYNQERSD MPLDVFDPAA YDASGGLVFD KIGKLTYMPP LRTRSAGAFA QLQHRFDEHW SIDGGLRYEY STAEFDDFIP LSESKAASPV TVKGGDLDYD AVLSNLGIVY SPVAGQEIYA SFSQGFQLPD VGIQLRNARR GFDIGSSNLE PVKTNNYELG WRGAIGGNTL GSLALFYTTS KLGDVQSFNN GLILTRTKER IYGVEASADW LSDDEVWGAG GSATWMRGRE KPDGKDWQDM TGYRVPPLKL TAYLQYKPDA DWNNRLQATF FDSKDYRLDG VESFGRRQVS TYTTVDLVSQ YRITPDDQLS LGIQNLFNRD YYPLYSQLLR NNNNTSHLPA PGTVLTASYT HNW
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