Gene PA14_46200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_46200 
Symbol 
ID4382303 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp4107730 
End bp4108641 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content67% 
IMG OID639326275 
Producthypothetical protein 
Protein accessionYP_791840 
Protein GI116049357 
COG category[E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.0349407 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.0243238 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTAAGT CCGCCGATGC CTTCGCCTTC CAGACGATGC TGTTGCTCTG CGTGATCTGG 
GGCATCCAGC AGGTGACCAT CAAGTGGGCG GCGACGGACA TCGCGCCGGT CATGCAGGCG
GCCATCCGTT CCGGCATCGC CGCCGCCCTG GTCGGCCTGC TGATGTGCTG GCGCGGCGGC
TGGGAGGGCT TGCGCCAGGG CACCCTGGGC GCCGGCCTGC TGACCGGCAC GCTGTTCGCC
CTGGAGTTCC TGTTCATCGC CCTCGGCCTG CAATACACCA CGGCTTCGCA CATGTCGGTG
TTCCTCTATA CCGCGCCGAT CTTCTCTGCC CTCGGGCTGC ACTTCCTGCT TCCCAGCGAA
CGCCTGCGGC CCTTGCAGTG GCTGGGCGTG GCGGTGTGCT TCGGCGGCAT AGCGGTGGCC
TTCGGCGGAG GCCTGTCGTG GGCGGAAATG GATGGGCGGA TGCTGCTCGG CGACGCTTTC
GGCCTGCTCG CCGGGATGTC CTGGGGCGCG ACCACGGTGG CAGTGCGCGG CACCCGGCTG
TCCGAGGCAC CGCCAAGCCT GACGCTGTTC TACCAATTGT TCGTGGCATG CGCCGGGTTA
TTGCTGATCG CTCTTTTCAG CGGCCAGCTC GGCGAGGTCC GCTGGACCCC GGTGAGCACC
GCCAGCGTGC TGTTCCAGGG CGTGGTGGTG TCGTTCGCCA GCTACTTCTG CTGGTTCTGG
TTGCTGCGTC GCTACCTGGC GAACAACCTG GCGATCTTCT CCTTCATGAC CCCCCTGTTC
GGCGTCACCT TCGGCGTATT GCTGCTGGGC GAGCCGCTCA GCCTGAACTT CGTCGCCGGC
GCGGCGCTGG TCCTCGCCGG CATCACCCTG GTCAGCGGCG AGCAGTGGCT GCGACGCCTG
CTGCGACGCT GA
 
Protein sequence
MRKSADAFAF QTMLLLCVIW GIQQVTIKWA ATDIAPVMQA AIRSGIAAAL VGLLMCWRGG 
WEGLRQGTLG AGLLTGTLFA LEFLFIALGL QYTTASHMSV FLYTAPIFSA LGLHFLLPSE
RLRPLQWLGV AVCFGGIAVA FGGGLSWAEM DGRMLLGDAF GLLAGMSWGA TTVAVRGTRL
SEAPPSLTLF YQLFVACAGL LLIALFSGQL GEVRWTPVST ASVLFQGVVV SFASYFCWFW
LLRRYLANNL AIFSFMTPLF GVTFGVLLLG EPLSLNFVAG AALVLAGITL VSGEQWLRRL
LRR