Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_45630 |
Symbol | fliA |
ID | 4380182 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 4058676 |
End bp | 4059419 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639326232 |
Product | flagellar biosynthesis sigma factor |
Protein accession | YP_791797 |
Protein GI | 116049400 |
COG category | [K] Transcription |
COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
TIGRFAM ID | [TIGR02479] RNA polymerase sigma factor, FliA/WhiG family [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.0531213 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 0.225194 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAGCGG CCTCTGGAGT GCGTATGTAT AGCAAGGCGC AAGCGCAGAA CTCCCAGGAG CAACTGATCC AGCGTTACGC ACCACTGGTC AAGCGCATCG CCTATCACCT GCTCGGCCGC CTGCCGGCCA GCGTGCAGGT GGAGGACCTG ATGCAGGCCG GCATGATCGG CCTGCTCGAG GCCGCGAAGA AATACGACGC CGGCAAGGGC GCCAGCTTCG AGACCTATGC CGGCATCCGC ATCCGCGGGG CCATGCTCGA CGAGGTCCGC AAGGGCGACT GGGCGCCTCG TTCGGTGCAC CGCAACACGC GCATGGTGAC CGACGCGATC CGCGCGATCG AGGCGAGAAC CGGACGCGAC GCTAAAGATC ACGAAGTTGC TGCCGAACTC CAATTGAGCC TCGAAGATTA CTACGGCATC CTCAGCGACA CGCAGGGCAG CCGCCTGTAC AGCTTCGACG ACCTGTTGCA GGACGGCGAA CATGGATTGC CGGAAGACAC CAGCCTCAGT CACAACGAAC CGATCCACGG CCTGCTCGAC GAACGTTTCC AGGCGGCCCT GGCGGATGCC ATCGCCAAGT TGCCGGAGCG CGAGCGCCTG GTGCTGGCGT TGTATTACGA CGAGGAACTC AACCTCAAGG AGATCGGCGA GGTACTGGGC GTCAGCGAAT CGCGGGTCAG CCAGTTGCAC AGCCAGTGCG CCGCGCGTTT GCGTGCGCGC CTGGCCGATT GGCGGTCGGC CTGA
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Protein sequence | MTAASGVRMY SKAQAQNSQE QLIQRYAPLV KRIAYHLLGR LPASVQVEDL MQAGMIGLLE AAKKYDAGKG ASFETYAGIR IRGAMLDEVR KGDWAPRSVH RNTRMVTDAI RAIEARTGRD AKDHEVAAEL QLSLEDYYGI LSDTQGSRLY SFDDLLQDGE HGLPEDTSLS HNEPIHGLLD ERFQAALADA IAKLPERERL VLALYYDEEL NLKEIGEVLG VSESRVSQLH SQCAARLRAR LADWRSA
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