Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_44740 |
Symbol | xdhB |
ID | 4384720 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 3986936 |
End bp | 3989335 |
Gene Length | 2400 bp |
Protein Length | 799 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639326165 |
Product | xanthine dehydrogenase |
Protein accession | YP_791730 |
Protein GI | 116049467 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG4631] Xanthine dehydrogenase, molybdopterin-binding subunit B |
TIGRFAM ID | [TIGR02965] xanthine dehydrogenase, molybdopterin binding subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.0454132 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTAACC ATCGCAAGCC GCACAAGAGC CAGGAAGAGC TGGCCGACCT GTTCCGCGCC GAGCTGACCA CCGGAGTCGG CCGCAGCGTC AAGCACGAAA GCGCCCCCAA GCACGTCAGC GGCGAGGCGA TCTACATCGA CGATCGCCTG GAGTTTCCCA ACCAGTTGCA CGTCTATGCG CGCCTGAGCG AGCGCGCCCA CGCCCGCATC ACCCGCCTCG ACGTGACGCC CTGCTACCAG TTCCCCGGCG TCGCCATCGC CCTCACCGCC GCCGACGTTC CCGGCCAGCT CGACATCGGC CCGGTGGTGG CCGGCGACCC GCTGCTGGCC GATGGCAAGG TGGAGTATGT CGGACAGATG GTCCTGGCGG TCGCCGCCGA CAGCCTGGAA ACCGCGCGCA AGGCGGCCAT GGCGGCGATC GTCGAGTACG AAGACCTGGA ACCGGTGCTC GACGTGGTCG AGGCCCTGCG CAAGCGCCAT TTCGTCCTCG ACAGCCACCA GCACCGCATC GGCGACTCCG CCGCCGCGCT GGCCGGCGCG CCGCATCGCC TGCAAGGCAC GCTGCACATC GGCGGCCAGG AGCATTTCTA CCTGGAAACG CAGATTTCCT CGGTAATGCC CAGCGAAGAC GGCGGCATGA TCGTCTATTG CTCGACGCAG AACCCCACCG AAGTGCAGAA GCTGGTGGCC GAGGTCCTCG GGGTTTCCTT CAACCGCATC GTCATCGACA TGCGCCGCAT GGGCGGCGGC TTCGGCGGCA AGGAAACCCA GGCCGCGGCG CCGGCCTGCC TGTGCGCGGT GGTCGCCTAC CACACCGGGC GTCCGGCGAA GATGCGCCTG CCGCGCATGG AGGACATGCA GATCACCGGC AAGCGTCACC CGTTCTACGT CGAATACGAC GTCGGCTTCG ACGACGATGG CCGCCTGCAC GGCATCCAGA TCGACCTGGC CGGCAACTGC GGCTATTCGC CGGACCTCTC CGGCTCGATC GTCGACCGCG CCATGTTCCA CTCGGACAAC GCCTACTTCC TCGGCAACGC CACCATCAAC GGCCACCGTT GCAAGACCAA CACCGCCTCG AACACCGCCT ACCGCGGTTT CGGCGGGCCC CAGGGAATGG TCGCCATCGA GGAGATCATG GACGCCGTGG CCCGCAGCCT CGGCAAGGAT CCGCTGGAGG TGCGCAAGCT CAACTACTAC GGCAAGGACG AGCGCAACGT CACCCATTAC CACCAGACCG TCGAGCACAA CCTGCTGGCG GAGATGACTG CCGAGCTGGA AGCGAGCAGC GAGTACGCCC GCCGCCGCGA GGAAATCCGT GCGTTCAATG CCGCCAGCCC GGTCCTGAAG AAAGGCCTGG CGCTGACCCC GGTGAAGTTC GGCATTTCGT TCACCGCGAC CTTCCTCAAC CAGGCAGGTG CGCTGATCCA CATCTATACC GACGGCAGCA TCCACCTGAA CCATGGCGGC ACCGAAATGG GCCAGGGCCT CAACACCAAG GTCGCCCAGG TGGTCGCCGA GGTCTTCCAG GTCGACGTGG AGCGCATCCA GATCACCGCC ACCAATACCG ACAAGGTGCC CAACACCTCG CCCACCGCCG CCTCCTCGGG CACCGACCTG AACGGCAAGG CCGCGCAGAA TGCCGCCGAA ACCATCAAGC GGCGCCTGGT GGAGTTCGCC GCGCGGCACT GGAAGGTCAG CGAGGAAGAC GTCGAGTTCC GCAACAACCA GGTGCGTATC CGCGAGCTGA TCCTGCCGTT CGAGGAACTG GTCCAGCAGG CCTACTTCGG CCAGGTCTCG TTGTCCAGCA CCGGCTTCTA CCGCACGCCG AAGATCTTCT ACGACCGCGA ACAGGCCCGT GGCCGGCCCT TCTATTATTT CGCCTACGGC GCCGCCTGCT CGGAGGTGAT AGTCGACACC CTCACCGGCG AATACCGCAT GCTGCGCACC GACATCCTGC ATGACGTCGG CGACTCGCTG AACCCGGCCA TCGACATCGG CCAGGTTGAA GGCGGCTTCG TCCAGGGCAT GGGCTGGCTG ACCATGGAGG AACTGGTCTG GAACGCCAAG GGCAAGCTGA TGACCAGCGG CCCGGCCAGC TACAAGATTC CCGCCGTCGC CGACATGCCG CTGGACCTGC GGGTGAAACT GCTGGAGAAC CGCAAGAATC CGGAGCAGAC CGTGTTCCAT TCCAAGGCCG TGGGCGAGCC GCCGTTCATG CTCGGCATCT CGGTCTGGTG CGCGATCAAG GACGCCGTGG CCAGCCTCGC CGACTACCGC GCGCAACCCG CCATCGACGC GCCGGCGACG CCCGAGCGGG TGCTCTGGGG CGTGGAACAG ATGCGCCGGC TGAAGGCCGC CCAGGCACAA GCGGCGGACG CCGCGGTCGA ACCGGCCTGA
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Protein sequence | MSNHRKPHKS QEELADLFRA ELTTGVGRSV KHESAPKHVS GEAIYIDDRL EFPNQLHVYA RLSERAHARI TRLDVTPCYQ FPGVAIALTA ADVPGQLDIG PVVAGDPLLA DGKVEYVGQM VLAVAADSLE TARKAAMAAI VEYEDLEPVL DVVEALRKRH FVLDSHQHRI GDSAAALAGA PHRLQGTLHI GGQEHFYLET QISSVMPSED GGMIVYCSTQ NPTEVQKLVA EVLGVSFNRI VIDMRRMGGG FGGKETQAAA PACLCAVVAY HTGRPAKMRL PRMEDMQITG KRHPFYVEYD VGFDDDGRLH GIQIDLAGNC GYSPDLSGSI VDRAMFHSDN AYFLGNATIN GHRCKTNTAS NTAYRGFGGP QGMVAIEEIM DAVARSLGKD PLEVRKLNYY GKDERNVTHY HQTVEHNLLA EMTAELEASS EYARRREEIR AFNAASPVLK KGLALTPVKF GISFTATFLN QAGALIHIYT DGSIHLNHGG TEMGQGLNTK VAQVVAEVFQ VDVERIQITA TNTDKVPNTS PTAASSGTDL NGKAAQNAAE TIKRRLVEFA ARHWKVSEED VEFRNNQVRI RELILPFEEL VQQAYFGQVS LSSTGFYRTP KIFYDREQAR GRPFYYFAYG AACSEVIVDT LTGEYRMLRT DILHDVGDSL NPAIDIGQVE GGFVQGMGWL TMEELVWNAK GKLMTSGPAS YKIPAVADMP LDLRVKLLEN RKNPEQTVFH SKAVGEPPFM LGISVWCAIK DAVASLADYR AQPAIDAPAT PERVLWGVEQ MRRLKAAQAQ AADAAVEPA
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