| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_44370 |
|---|
| Symbol | |
|---|
| ID | 4383046 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | + |
|---|
| Start bp | 3950769 |
|---|
| End bp | 3952196 |
|---|
| Gene Length | 1428 bp |
|---|
| Protein Length | 475 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 639326133 |
|---|
| Product | cbb3-type cytochrome c oxidase subunit I |
|---|
| Protein accession | YP_791698 |
|---|
| Protein GI | 116049499 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG3278] Cbb3-type cytochrome oxidase, subunit 1 |
|---|
| TIGRFAM ID | [TIGR00780] cytochrome c oxidase, cbb3-type, subunit I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 59 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACAG CAATCAGTCA GACTGCTTAT AACTATAAGG TGGTCCGCCA GTTCGCCGTT
ATGACGGTGG TCTGGGGGGT CATTGGAATG GGTCTCGGTG TCCTGATCGC CGCCCAACTG
GTATGGCCCG AATTGAACTT CGACCTGCCG TGGACGAGCT TCGGCCGCCT TCGCCCCCTG
CACACCAACG CGGTGATCTT CGCCTTCGGT GGGTGCGCCC TCTTCGCCAC CTCGTACTAC
GTGGTGCAAC GTACCTCGCA AGCCCGACTG ATTTCAGACA CGCTGGCGGC CTTCACCTTC
TGGGGTTGGC AGGCCGTGAT CGTGGGCGCC GTGCTGACCC TGCCGCAGGG TTTCACCACC
TCCAAGGAAT ACGCCGAACT GGAATGGCCG CTGGCCATCC TCCTGGCGAT CGTCTGGATC
ACCTACGCGA TCGTGTTCTT CGGCACCATC GTCAAGCGCA AGGTCAAGCA CATCTATGTG
GGCAACTGGT TCTACGGTGC CTTCATCCTG GTGACGGCGA TGCTGCATAT CGTCAACCAC
ATGTCGCTGC CGGTGAGCTG GTTCAAGTCC TACTCCGCCT ACTCCGGCGC CACCGATGCG
ATGGTCCAGT GGTGGTACGG CCACAACGCC GTGGGCTTCT TCCTGACCAC CGGCTTCCTC
GGCATGATGT ACTACTTCGT GCCCAAGCAG GCCGAGCGTC CGGTCTATTC CTATCGCCTG
TCCATCGTCC ACTTCTGGGC GCTGATCTCC CTGTACATCT GGGCCGGCCC GCACCACCTG
CACTACACCG CGCTGCCGGA CTGGGCGCAG TCGCTGGGCA TGGTGATGTC GCTGATCCTC
CTGGCACCGA GCTGGGGCGG CATGATCAAC GGCATGATGA CCCTCTCCGG CGCCTGGCAT
AAGCTGCGCA CCGACCCGAT CCTGCGCTTC CTGGTGGTAT CCCTGGCCTT CTACGGCATG
TCCACCTTCG AAGGCCCGAT GATGGCGATC AAGACCGTCA ACGCCCTCTC CCACTACACC
GACTGGACCA TCGGCCACGT GCACGCCGGC GCCCTCGGCT GGGTGGCGAT GATCTCCATC
GGCTCGCTCT ACCACCTGAT CCCGAAAGTC TTCGGTCGCC CGCAGATGCA CAGCATCGGC
CTGATCAACG CGCACTTCTG GCTGGCCACC ATCGGCACCG TGCTGTACAT CGCCTCGATG
TGGGTCAACG GCATCACCCA GGGCCTGATG TGGCGCGCGG TCAACGAGGA CGGCACCCTG
ACCTACTCCT TCGTTGAAGC ACTGGTCGCA AGCCACCCGG GCTTCATCGT GCGCATGATC
GGCGGTGGTT TCTTCCTCAC CGGCATGCTG CTGATGGCCT ACAACACCTG GCGCACCGTG
CGTGCTGCCA AGCCGGCCGA ATACGAAGCC GCCGCGCAGA TCGCCTGA
|
|---|
| Protein sequence | MSTAISQTAY NYKVVRQFAV MTVVWGVIGM GLGVLIAAQL VWPELNFDLP WTSFGRLRPL
HTNAVIFAFG GCALFATSYY VVQRTSQARL ISDTLAAFTF WGWQAVIVGA VLTLPQGFTT
SKEYAELEWP LAILLAIVWI TYAIVFFGTI VKRKVKHIYV GNWFYGAFIL VTAMLHIVNH
MSLPVSWFKS YSAYSGATDA MVQWWYGHNA VGFFLTTGFL GMMYYFVPKQ AERPVYSYRL
SIVHFWALIS LYIWAGPHHL HYTALPDWAQ SLGMVMSLIL LAPSWGGMIN GMMTLSGAWH
KLRTDPILRF LVVSLAFYGM STFEGPMMAI KTVNALSHYT DWTIGHVHAG ALGWVAMISI
GSLYHLIPKV FGRPQMHSIG LINAHFWLAT IGTVLYIASM WVNGITQGLM WRAVNEDGTL
TYSFVEALVA SHPGFIVRMI GGGFFLTGML LMAYNTWRTV RAAKPAEYEA AAQIA
|
|---|
| |