Gene PA14_43480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_43480 
Symbol 
ID4381644 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp3872515 
End bp3873162 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content68% 
IMG OID639326059 
ProductGntR family transcriptional regulator 
Protein accessionYP_791624 
Protein GI116049572 
COG category[K] Transcription 
COG ID[COG2186] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCATTC CCCTCAAGCG CTCCCTGGTG GACATCGCCC TGGAGCAGAT CCGCCAGCGC 
ATCGACGCCG GCCATTGGCC GCTCGGCCAA CGCCTGCCGC CGGAGCCGGA ACTCGCCGAG
CTGCTCGGCA TGAGCCGCAA CACCGTGCGC GAAGCGGTGC GCGTGCTGAC CTTCTCCGGC
GTGCTGGAAG TCCGCCAGGG CGACGGCACC TACGTGCGCG CCTGCGCCGA TCCGCTGGAA
ACCATGCTGG TGCTGGCGCG CAGCGCGGTG CAGCACTCCC TGGAGGCACG CGGGATGATC
GAGATCGAGG CGGCGCGCCT GGCTGCCGTT CGCCGCGACG ACAGCGACCT GAGCGCATTG
CGCGAGCATC TCGACGCTTC GCGCCAGCGC TACGGCAGCG ACGACCTGCA GGACTACATC
GAGCACGACG TCCGCTTCCA CCAACGGATG GTCGATGCCG CCCACAATCC GGTGCTCAGC
GAACTCTACC GCTACTTCTC GCAGGTCATC CGGACCTCGC TGGAACGCAC CATGGCCGAC
CCACAAAGGG CCCAGCCCTG CTTCGAGCTG CACCAGCAAC TGCTCGATGC CATAGAACGC
GGAGACCCGG ACGCTGCCGC CGCGGCCAAC CGCGCACTGC TGATCTGA
 
Protein sequence
MTIPLKRSLV DIALEQIRQR IDAGHWPLGQ RLPPEPELAE LLGMSRNTVR EAVRVLTFSG 
VLEVRQGDGT YVRACADPLE TMLVLARSAV QHSLEARGMI EIEAARLAAV RRDDSDLSAL
REHLDASRQR YGSDDLQDYI EHDVRFHQRM VDAAHNPVLS ELYRYFSQVI RTSLERTMAD
PQRAQPCFEL HQQLLDAIER GDPDAAAAAN RALLI