Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_43480 |
Symbol | |
ID | 4381644 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 3872515 |
End bp | 3873162 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639326059 |
Product | GntR family transcriptional regulator |
Protein accession | YP_791624 |
Protein GI | 116049572 |
COG category | [K] Transcription |
COG ID | [COG2186] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 67 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCATTC CCCTCAAGCG CTCCCTGGTG GACATCGCCC TGGAGCAGAT CCGCCAGCGC ATCGACGCCG GCCATTGGCC GCTCGGCCAA CGCCTGCCGC CGGAGCCGGA ACTCGCCGAG CTGCTCGGCA TGAGCCGCAA CACCGTGCGC GAAGCGGTGC GCGTGCTGAC CTTCTCCGGC GTGCTGGAAG TCCGCCAGGG CGACGGCACC TACGTGCGCG CCTGCGCCGA TCCGCTGGAA ACCATGCTGG TGCTGGCGCG CAGCGCGGTG CAGCACTCCC TGGAGGCACG CGGGATGATC GAGATCGAGG CGGCGCGCCT GGCTGCCGTT CGCCGCGACG ACAGCGACCT GAGCGCATTG CGCGAGCATC TCGACGCTTC GCGCCAGCGC TACGGCAGCG ACGACCTGCA GGACTACATC GAGCACGACG TCCGCTTCCA CCAACGGATG GTCGATGCCG CCCACAATCC GGTGCTCAGC GAACTCTACC GCTACTTCTC GCAGGTCATC CGGACCTCGC TGGAACGCAC CATGGCCGAC CCACAAAGGG CCCAGCCCTG CTTCGAGCTG CACCAGCAAC TGCTCGATGC CATAGAACGC GGAGACCCGG ACGCTGCCGC CGCGGCCAAC CGCGCACTGC TGATCTGA
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Protein sequence | MTIPLKRSLV DIALEQIRQR IDAGHWPLGQ RLPPEPELAE LLGMSRNTVR EAVRVLTFSG VLEVRQGDGT YVRACADPLE TMLVLARSAV QHSLEARGMI EIEAARLAAV RRDDSDLSAL REHLDASRQR YGSDDLQDYI EHDVRFHQRM VDAAHNPVLS ELYRYFSQVI RTSLERTMAD PQRAQPCFEL HQQLLDAIER GDPDAAAAAN RALLI
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