Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_43420 |
Symbol | |
ID | 4381648 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 3867742 |
End bp | 3868896 |
Gene Length | 1155 bp |
Protein Length | 384 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639326055 |
Product | putative acyl-CoA dehydrogenase |
Protein accession | YP_791620 |
Protein GI | 116049576 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.0779209 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 58 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTCGTG ATCCGGAAAC CCTGAACCTG CTGCTGGACA GCATCCGCCA GTTCGTCCGC GAAAGCCTGG TGCCTCATGA GCAGGAGGTG GCGGAAACCG ACCGCATCCC CGAGGCGATC ATCGCCCGCA TGCGCGAGAT GGGCCTGTTC GGCCTGTCGA TCCCGGAGGC CTACGGCGGC CTCGGGGTGA CCATGGAGGA AGAGGTGAGC ATCGCCTTCG AACTGGGGCG GACCTCGCCG GCGTTCCGTT CGCTGCTGGG CACCAACAAT GGCATCGGCT CCCAGGGCAT CGTCATCGAC GGCACCGAAG AACAGAAGCG GCGCTACCTG CCGCGCCTGG CGTCGGGCGA ACTGCTCAGT TCGTTCTGCC TCACCGAACC GGACTCCGGT TCCGACGCCG CCTCGCTGAA GACCACGGCG GTGCGTGACG GCCAGCACTA CGTGCTCAAC GGTACCAAGC GCTTCATCAC CAACGCCCCG CAGGCCGGCA TCTACACCGT GATGGCACGC ACCGACCCGG CGATCCGTGG CGCCGGCGGA ATCTCCGCTT TCGTCGTCGA GCGCGGTACG CCCGGGCTGT CCCTGGGCAA GCCGGATCGC AAGATGGGAC AGAAGGGCGC GCATACCTGT GACGTGATCT TCGACGACTG CCGGGTGCCT GCCAGCCAGT TGATCGGCGG GGTCGAGGGC GTCGGCTTCA AGACCGCGAT GAAGGTGCTC GACAAGGGCC GCCTGCACAT CGCCGCGGTC TGCGTGGGGG TCGCCGAGCG GATGCTCGAG GATGCGTTGC GCTATGCTCT GGAACGCAAG CAGTTCGGCC AGCCGATCGC CGAGTTCCAG TTGATCCAGG CAATGCTCGC CGACAGCAAG GCCGAGGCCT ACGCGGCGCG CTGCATGGTC ATCGACGCCG CGCGGCAGCG CGACGAAGGC CGCGATGTCG GTACCGAGGC GTCCTGCGCC AAGCTGTTCG CCTCGGAAAT GTGCGGCCGC GTCGCCGACC GCGCGGTGCA GATCTTCGGC GGCGCCGGCT ATATCGGCGA CTATGGGATC GAGCGCTTCT ATCGCGACGT GCGACTGTTC CGCATCTACG AGGGCACCAC GCAGATCCAG CAACTACTGA TCGCCCGCAA CATGATCCGC GCCGCCCAGG GCTAG
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Protein sequence | MIRDPETLNL LLDSIRQFVR ESLVPHEQEV AETDRIPEAI IARMREMGLF GLSIPEAYGG LGVTMEEEVS IAFELGRTSP AFRSLLGTNN GIGSQGIVID GTEEQKRRYL PRLASGELLS SFCLTEPDSG SDAASLKTTA VRDGQHYVLN GTKRFITNAP QAGIYTVMAR TDPAIRGAGG ISAFVVERGT PGLSLGKPDR KMGQKGAHTC DVIFDDCRVP ASQLIGGVEG VGFKTAMKVL DKGRLHIAAV CVGVAERMLE DALRYALERK QFGQPIAEFQ LIQAMLADSK AEAYAARCMV IDAARQRDEG RDVGTEASCA KLFASEMCGR VADRAVQIFG GAGYIGDYGI ERFYRDVRLF RIYEGTTQIQ QLLIARNMIR AAQG
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