Gene PA14_43030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_43030 
Symbol 
ID4382920 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp3827587 
End bp3829062 
Gene Length1476 bp 
Protein Length491 aa 
Translation table11 
GC content62% 
IMG OID639326023 
Producthypothetical protein 
Protein accessionYP_791588 
Protein GI116049607 
COG category[S] Function unknown 
COG ID[COG3517] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03355] type VI secretion protein, EvpB/VC_A0108 family 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value0.182663 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACCA GTGCCGCACA GCAAGGCCGG AACCAGAACG GCGAATACAA CATTCTCGAC 
AGCATCATCG CCGAGACCCG CCTGAGCCCG GACGACGAGG CCTACGACAT CGCCAAGCGC
GGCGTCTCCG CCTTCATCGA GGAATTGCTC AAGCCGCAGA ACGACGGCGA GCCGGTGAAG
AAGGCGATGG TCGACCGGAT GATCGCCGAG ATCGATGCCA AGCTCAGCAC GCAGATGGAC
GAGATCCTCC ATCATCCCGA TTTCCAGGCG CTGGAGTCGG CCTGGCGCGG CCTGCAACTG
CTGGTCGACC GCACCAACTT CCGCGAGAAC ATCAAGATCG AGATTCTCAG CGTTTCCAAG
CAGGACCTGC TGGACGATTT CGAGGACTCG CCCGAGGTGA TGCAGTCCGG CCTGTACAAG
CACATCTACA CCGCCGAATA CGGCCAGTTC GGTGGCCAGC CGGTCGGCGC CATCATCGCC
AACTACTACA TGTCGCCCAG TTCGCCCGAC GTCAAGCTGA TGCAATACGT CTCCAGCGTG
GCCTGCATGG CCCATGCGCC GTTCGTGGCG GCCGCCGGTC CGAAGTTCTT CGGCCTGGAA
AGCTTCACCG GCCTGCCGGA CCTGAAGGAC CTGAAGGATC ATTTCGAAGG CCCGCAGTTC
GCCAAGTGGC AGAGCTTCCG CCAGTCCGAG GATTCCCGCT ACGTGGCGCT GACCGTACCG
CGCTTCCTGC TGCGCACGCC CTACGATCCG GAAGAGAATC CGGTCAAGTC GTTCGCCTAC
AAGGAGACCG TGGCCAATAG CCATGAGCAT TACCTGTGGG GCAACACCGC CTATGCCTTC
GGCACCAAGC TGACCGACAG CTTCGCCAAG TATCGCTGGT GCCCGAACAT CATCGGGCCG
CAGAGCGGCG GTGCGGTGGA GGACCTGCCT TTGCACCACT TCGAGAGCAT GGGCGAGATC
GAGACCAAGA TCCCCACCGA GGTGCTGGTG TCCGATCGCC GCGAGTACGA ACTGGCCGAG
GAAGGCTTCA TTTCCCTGAC CATGCGCAAG GGCAGCGACA ACGCCGCGTT CTTCTCCGCC
AGCTCGGTGC AGAAGCCGAA GTTCTTCGGC ATCAGCGCCG AAGGCAAGGC CGCGGAGCTG
AACTACAAGC TCGGCACCCA GTTGCCGTAC ATGATGATCG TCAACCGCCT GGCCCATTAC
CTGAAGGTCC TGCAACGCGA ACAGCTGGGG TCGTGGAAGG AGCGTACCGA CCTCGAGCTG
GAGCTGAACA AGTGGATCCG CCAGTACGTC GCCGACCAGG AAAACCCCAG CGCCGAAGTG
CGCGGCCGTC GCCCGCTGCG CGCTGCACAG ATCATCGTCA GTGACGTCGA GGGCGAGCCG
GGCTGGTACC GCGTCAGCCT GAACGTGCGC CCGCACTTCA AGTACATGGG GGCGGACTTC
ACCCTGTCGC TGGTCGGCAA GCTGGACAAA GAGTAA
 
Protein sequence
MSTSAAQQGR NQNGEYNILD SIIAETRLSP DDEAYDIAKR GVSAFIEELL KPQNDGEPVK 
KAMVDRMIAE IDAKLSTQMD EILHHPDFQA LESAWRGLQL LVDRTNFREN IKIEILSVSK
QDLLDDFEDS PEVMQSGLYK HIYTAEYGQF GGQPVGAIIA NYYMSPSSPD VKLMQYVSSV
ACMAHAPFVA AAGPKFFGLE SFTGLPDLKD LKDHFEGPQF AKWQSFRQSE DSRYVALTVP
RFLLRTPYDP EENPVKSFAY KETVANSHEH YLWGNTAYAF GTKLTDSFAK YRWCPNIIGP
QSGGAVEDLP LHHFESMGEI ETKIPTEVLV SDRREYELAE EGFISLTMRK GSDNAAFFSA
SSVQKPKFFG ISAEGKAAEL NYKLGTQLPY MMIVNRLAHY LKVLQREQLG SWKERTDLEL
ELNKWIRQYV ADQENPSAEV RGRRPLRAAQ IIVSDVEGEP GWYRVSLNVR PHFKYMGADF
TLSLVGKLDK E