| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_42940 |
|---|
| Symbol | |
|---|
| ID | 4382928 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | - |
|---|
| Start bp | 3817957 |
|---|
| End bp | 3818463 |
|---|
| Gene Length | 507 bp |
|---|
| Protein Length | 168 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639326015 |
|---|
| Product | putative lipoprotein |
|---|
| Protein accession | YP_791580 |
|---|
| Protein GI | 116049615 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3521] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR03352] type VI secretion lipoprotein, VC_A0113 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 57 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 0.177757 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTCGTC GCCCGATTCC GCCAGCCAGG GCGCTGGCCA TGCTCGCCGT CCTGGCGCTG
CTGGCCGGCT GTTCCACGCT GTCGCCGTAT TCCAGACTGA CCAAGCTCGA CCTCGCCCTG
AGCGCCGGCG AGCGGGTCAA TCCCGACCTC AATGGCCGGC CGTCGCCGGT GGTAGTGCGG
CTGTTCGAGC TGAAGCACCC GGTGGCGTTC GAGAACGCCG ACTTCTTCAG CCTCTACGAA
CGTCCCAAGG AGACCCTGGA CCCCGACCTG GTGACCAGCG AGGAGCTGGA GCTGCGGCCC
GGCGAGCGGG TCGAACTCAA ACTCAGCGTG GAGGAGGGGA GCCGCTACGT GGGCGTGCTC
GCCGCCTACC GCGATCTCGG CGAGGCAAGC TGGCGCTACG TGGTGCCGGT CACGGCGAAA
GAGCTGACCC GGGTAGAGCT GAAGCTGGGC CGGAAGGGCA TCCTGAATGC CGGCGAACTG
CTCGGCAAGG CGGGTGACGC GCGATGA
|
|---|
| Protein sequence | MSRRPIPPAR ALAMLAVLAL LAGCSTLSPY SRLTKLDLAL SAGERVNPDL NGRPSPVVVR
LFELKHPVAF ENADFFSLYE RPKETLDPDL VTSEELELRP GERVELKLSV EEGSRYVGVL
AAYRDLGEAS WRYVVPVTAK ELTRVELKLG RKGILNAGEL LGKAGDAR
|
|---|
| |