Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_42910 |
Symbol | |
ID | 4382930 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 3815757 |
End bp | 3816626 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639326013 |
Product | hypothetical protein |
Protein accession | YP_791578 |
Protein GI | 116049617 |
COG category | [S] Function unknown |
COG ID | [COG3455] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03349] type IV / VI secretion system protein, DotU family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 0.386497 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCAAGG AAAGGGAATA CCACGAGGAC GAGAAGACCG TCCTCCTCGA TCACCAGGGA CAGGTACCGG CCCAGGGGCC GCTGACCGAT TTCGCCGAAC CGCCGCGCTT CGAGCAGCTC GAGGAGCGGA TGATCTACGC GGCGCGCCTG CGTCCGGGCG AGGCCTTCAA CGTCAGCCTG AACCCGCTGG TGGCGGCGGC TTCCGAACTG CTTTCGGAAG TGGTCCGGCT CAAGCACAGC AGCGTGCTGG AGAACCTTGC GGCGCTCAAG GAGCGGTTGA CCTCCGCCAT GAAGCTCTTC GAATTCCGCG CCGTGCAGGA TGGCGTGGAA AACAGCCAGG TCATGGCGGC GCGCTACGTG CTGTGCACGG TGGTCGACGA GGCGGTGGTG ACCACCCCGT GGGGCAACGA AAGCGAATGG TCGAAGATCA GCCTGCTGAG CAGCTTCCAT AACGAGACCT TCGGCGGCGA GAAGTTCTTC CAGTTGCTCG ACCGGCTGTC GAAGAACCCG GTCAAGCATC TGCCGATGCT GGAGCTGATG TACCTCTGCC TGGCCCTCGG CTTCGAGGGC AAGTACCGGG TGATGGCTCG CGGCGTGCTC GACCTGGACG GTATTTCCGA TGCGCTCTAC CGGCAGATCC GCCAGTTGCG CGGCGACGTG CCGCGCGAAC TGTCGCCGCA CTGGCAGGGG CTCAGCGACC AGCGTCGCGG CCTGGTGCGG ATCGTGCCCT GGTGGATGGT GGCGCTGTTC ACCCTGGTCT GCCTGGTGGT GATGTATTCG GGATTCGCCT GGGTTCTCGG CGAGCAACGC GACACGGTGC TGCAGCCTTA CCAGTCGCTC GATGCGGCGG CAGGACAGCC CGGTTCGTAA
|
Protein sequence | MIKEREYHED EKTVLLDHQG QVPAQGPLTD FAEPPRFEQL EERMIYAARL RPGEAFNVSL NPLVAAASEL LSEVVRLKHS SVLENLAALK ERLTSAMKLF EFRAVQDGVE NSQVMAARYV LCTVVDEAVV TTPWGNESEW SKISLLSSFH NETFGGEKFF QLLDRLSKNP VKHLPMLELM YLCLALGFEG KYRVMARGVL DLDGISDALY RQIRQLRGDV PRELSPHWQG LSDQRRGLVR IVPWWMVALF TLVCLVVMYS GFAWVLGEQR DTVLQPYQSL DAAAGQPGS
|
| |