Gene PA14_42910 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_42910 
Symbol 
ID4382930 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp3815757 
End bp3816626 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content65% 
IMG OID639326013 
Producthypothetical protein 
Protein accessionYP_791578 
Protein GI116049617 
COG category[S] Function unknown 
COG ID[COG3455] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03349] type IV / VI secretion system protein, DotU family 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value0.386497 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAAGG AAAGGGAATA CCACGAGGAC GAGAAGACCG TCCTCCTCGA TCACCAGGGA 
CAGGTACCGG CCCAGGGGCC GCTGACCGAT TTCGCCGAAC CGCCGCGCTT CGAGCAGCTC
GAGGAGCGGA TGATCTACGC GGCGCGCCTG CGTCCGGGCG AGGCCTTCAA CGTCAGCCTG
AACCCGCTGG TGGCGGCGGC TTCCGAACTG CTTTCGGAAG TGGTCCGGCT CAAGCACAGC
AGCGTGCTGG AGAACCTTGC GGCGCTCAAG GAGCGGTTGA CCTCCGCCAT GAAGCTCTTC
GAATTCCGCG CCGTGCAGGA TGGCGTGGAA AACAGCCAGG TCATGGCGGC GCGCTACGTG
CTGTGCACGG TGGTCGACGA GGCGGTGGTG ACCACCCCGT GGGGCAACGA AAGCGAATGG
TCGAAGATCA GCCTGCTGAG CAGCTTCCAT AACGAGACCT TCGGCGGCGA GAAGTTCTTC
CAGTTGCTCG ACCGGCTGTC GAAGAACCCG GTCAAGCATC TGCCGATGCT GGAGCTGATG
TACCTCTGCC TGGCCCTCGG CTTCGAGGGC AAGTACCGGG TGATGGCTCG CGGCGTGCTC
GACCTGGACG GTATTTCCGA TGCGCTCTAC CGGCAGATCC GCCAGTTGCG CGGCGACGTG
CCGCGCGAAC TGTCGCCGCA CTGGCAGGGG CTCAGCGACC AGCGTCGCGG CCTGGTGCGG
ATCGTGCCCT GGTGGATGGT GGCGCTGTTC ACCCTGGTCT GCCTGGTGGT GATGTATTCG
GGATTCGCCT GGGTTCTCGG CGAGCAACGC GACACGGTGC TGCAGCCTTA CCAGTCGCTC
GATGCGGCGG CAGGACAGCC CGGTTCGTAA
 
Protein sequence
MIKEREYHED EKTVLLDHQG QVPAQGPLTD FAEPPRFEQL EERMIYAARL RPGEAFNVSL 
NPLVAAASEL LSEVVRLKHS SVLENLAALK ERLTSAMKLF EFRAVQDGVE NSQVMAARYV
LCTVVDEAVV TTPWGNESEW SKISLLSSFH NETFGGEKFF QLLDRLSKNP VKHLPMLELM
YLCLALGFEG KYRVMARGVL DLDGISDALY RQIRQLRGDV PRELSPHWQG LSDQRRGLVR
IVPWWMVALF TLVCLVVMYS GFAWVLGEQR DTVLQPYQSL DAAAGQPGS