| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_42690 |
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| Symbol | speE |
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| ID | 4381416 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | - |
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| Start bp | 3797585 |
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| End bp | 3798445 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639325993 |
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| Product | spermidine synthase |
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| Protein accession | YP_791558 |
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| Protein GI | 116049637 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0421] Spermidine synthase |
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| TIGRFAM ID | [TIGR00417] spermidine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 57 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 59 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGATT ATCAGGAAAC TTTGTACCAG GGCTACGGCC AGCGCTTCAG CATCGACAAC
ATGCTGCATG AGGTGCGCAC CGAGCACCAG CACCTGGTGA TTTTCGAAAA CGCCCGGATG
GGCCGGGTGA TGGCGCTCGA CGGAGTGATC CAGACCACCG AGGCCGACGA GTTCATCTAC
CACGAGATGC TCACCCACGT GCCGATCCTC GCCCACGGCG CGGCCCGGCG CGTGTTGATC
ATCGGCGGTG GCGACGGCGG CATGCTGCGC GAGGTGGCCA AGCACAAGAG CGTCGAGCGG
ATCACCATGG TCGAGATCGA CGGCACCGTG GTTGACATGT GTAAGGAGTT CCTGCCCAAC
CACTCCCAGG GCGCCTTCGA CGACCCGCGG CTGAACCTGG TGATCGACGA CGGCATGCGC
TTCGTGGCTA CCACGGAAGA ACGCTTCGAC GTGATCATCT CCGACTCCAC CGACCCGATC
GGCCCTGGCG AGGTGCTGTT CTCCGAGAAC TTCTACCAGG CCTGCCGGCG CTGCCTGAAC
GAGGGCGGCA TCCTGGTCAC CCAGAACGGC ACGCCGTTCA TGCAACTGGA GGAAGTGCGC
ACCACCGCCG CGCGTACCGA CGGGCTGTTC GCCGACTGGC ATTTCTACCA GGCGGCGGTG
CCGACCTATA TCGGCGGCGC CATGACCTTC GCCTGGGGTT CGACTCGCGA AGGCCTGCGT
CGCCTTCCGC TGGAAACGCT GCGCCAGCGC TTCCGCGACA GCGGCATCGC CACCCGCTAC
TACAACGCCG ATATCCACCT GGGCGCGTTT GCTCTGCCGC AGTACGTGCT GCAGGCCATC
GGCAAGCAGG ACAACGACTG A
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| Protein sequence | MSDYQETLYQ GYGQRFSIDN MLHEVRTEHQ HLVIFENARM GRVMALDGVI QTTEADEFIY
HEMLTHVPIL AHGAARRVLI IGGGDGGMLR EVAKHKSVER ITMVEIDGTV VDMCKEFLPN
HSQGAFDDPR LNLVIDDGMR FVATTEERFD VIISDSTDPI GPGEVLFSEN FYQACRRCLN
EGGILVTQNG TPFMQLEEVR TTAARTDGLF ADWHFYQAAV PTYIGGAMTF AWGSTREGLR
RLPLETLRQR FRDSGIATRY YNADIHLGAF ALPQYVLQAI GKQDND
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