| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_42660 |
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| Symbol | pscU |
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| ID | 4381419 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | + |
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| Start bp | 3793295 |
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| End bp | 3794344 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639325990 |
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| Product | translocation protein in type III secretion |
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| Protein accession | YP_791555 |
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| Protein GI | 116049640 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4792] Type III secretory pathway, component EscU |
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| TIGRFAM ID | [TIGR01404] type III secretion protein, YscU/HrpY family |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 59 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCCG AGAAGACCGA GCAGCCCACG GCGAAGAAGC TGCGCGACGC CCGCAGGCAG
GGCCAGGTGG TGAAGAGCAA GGAAATTGTC TCCAGCGCGT TGATCCTGTC GCTGGTGGCG
CTGCTGATGG GCTTTTCCGA CTACTACCTG GAGCATCTCG GCAAGCTGCT CCTGCTGCCC
GCCGAGTACA TCGACCTGCC GTTTCGCCAG GCGCTGGAGA CCATCCTGGA GAACCTTCTC
CAGGAACTCC TCTACCTGCT GGCGCCGGTC CTGCTGGTCG CGGCGCTGGT GGTGGTGCTC
AGCCATGTCG GCCAGTACGG CTTCCTGCTC AGCCTCGACA GCGTCAAGCC GGACCTGAAG
AAGATCAACC CGGTGGAGGG CGCGAAGAAG ATCTTCTCGA TCCGGAGCCT GGTGGAGTTC
CTCAAGTCGA CCCTGAAGGT CGCCCTGCTC TCCCTGCTGG TCTGGCTGAC CTTGCAGGGC
AACCTGGCCA GCCTCCTGCG GATTCCCGCC TGCGGGCTGG ACTGCGTGGC ACCGGTGAGC
GGGCTGATGC TCAGGCAACT GATGCTGGTC TGCGCGGTCG GCTTCCTGGC GATTGCCGTC
GCCGACTACG CCTTCGAACG CCACCAGCAC TACAAGCAGT TGCGCATGAG CAAGGACGAA
GTGAAGCGCG AGTACAAGGA GATGGAGGGC AGCCCGGAGA TCAAGAGCAA GCGTCGGCAA
TTCCATCAGG AACTGCAATC GAGCAACCTG CGCGCGGATG TCCGGCGTTC CTCGGTGATC
GTCGCCAACC CGACCCACGT CGCCATCGGC ATACGCTATC GACGCGGCGA AACACCCCTG
CCGCTGATCA CCCTGAAGCA CACCGACGCC CTGGCCCTGC GGGTCCGGCG CATCGCCGAG
GAAGAAGGAA TCCCGGTGCT GCAACGAGTT CCGCTGGCAC GGGCGCTGCT GCGCGACGGC
AATGTCGACC AGTACATACC GGCGGACCTG ATCCAGGCCA CCGCCGAAGT CCTGCGCTGG
CTGGAAAGCC AGCAGACGGA TACACCCTGA
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| Protein sequence | MSAEKTEQPT AKKLRDARRQ GQVVKSKEIV SSALILSLVA LLMGFSDYYL EHLGKLLLLP
AEYIDLPFRQ ALETILENLL QELLYLLAPV LLVAALVVVL SHVGQYGFLL SLDSVKPDLK
KINPVEGAKK IFSIRSLVEF LKSTLKVALL SLLVWLTLQG NLASLLRIPA CGLDCVAPVS
GLMLRQLMLV CAVGFLAIAV ADYAFERHQH YKQLRMSKDE VKREYKEMEG SPEIKSKRRQ
FHQELQSSNL RADVRRSSVI VANPTHVAIG IRYRRGETPL PLITLKHTDA LALRVRRIAE
EEGIPVLQRV PLARALLRDG NVDQYIPADL IQATAEVLRW LESQQTDTP
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