| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_42220 |
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| Symbol | |
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| ID | 4380363 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | + |
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| Start bp | 3764042 |
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| End bp | 3766099 |
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| Gene Length | 2058 bp |
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| Protein Length | 685 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639325953 |
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| Product | membrane sensor domain-containing protein |
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| Protein accession | YP_791518 |
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| Protein GI | 116049677 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 68 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTATCA GCAGCTACAA CCAGGTTCTT GTCGCCTTTT CCCTGATTGT GGCCATCCTG
GCGTCCTACA CCGCTCTCGA CATGGCCGGC CGGGTGACCC TGGCGAAAGG CCGCGAGGCG
CTCTCCTGGC TGATCGGCGG CGCTTTCGCC ATGGGCTTCG GCATCTGGTC GATGCATTTC
GTCGGCATGC TCGCCTTCAG CCTGCCGATC CCGCTCGGCT ACGACCTGGG CCTGACCCTG
CTGTCGCTGC TGCTGGCCGT CGGCAGTTCG GCCTTCGCCC TCTGGCTGGT GTGCCAGGCG
GAACTCCCCT GGCAACGCCT GGCGCTGGGC GCCCTGCTGA TAGGCAGCGG CATCGCCGCC
ATGCACTACA CCGGGATGGC CGCCCTGCTG ATGATGCCGG GGATCGTCTA CGACCCGCTG
TGGCTCGGCC TCTCCATCCT GATCGCGGTG ATCGCCTCCG GCGCCGCGCT GTGGATCGCC
TTCCGCCTGC GCCATGGCAG CCGGCGCATC GTCCTGGTCC GGGCCGGCGC CGCCCTGGTG
ATGGGCTGCG CCATCGTCGG CATGCACTAC ACCGGGATGG CCGCCGCGCA GTTCCCCCTG
GGCAGCTTCT GCGGCGCCGC CGGCCGAGGC ATCGACAACG GCTGGCTGGC GGTGCTGGTC
ATCGTGATCA CCCTGGCGGT GATCGCCATC GCCCTGATCG TCTCGGTGCT GGACTCGCGC
CTGGAGGCGC GTACCTCGGT GCTCGCCACC TCCCTCGCAC GAGCCAACCG CGAGCTGATC
CAGTTGGCCC TGCACGACAA CCTGACCAAG CTGCCCAACC GCATGCTCCT CGACGACCGC
CTGGAGCAGG CGATCCAGCA GGCGATCCGC GACGATCGCC GGTTCGCCGT GCTGTTCATG
GACCTGGACG GCTTCAAGGC GGTCAACGAT GCCTACGGCC ATCACCTCGG CGACCTGTTG
CTGATCGAAG TCGCCGAGCG TATCCGCGCC AACGTCCGCG CCCAGGACAC CATCGCCCGC
CTCGGCGGCG ACGAGTTCGT CCTGCTGATC GAGGCCCGCG AGCCCGCCGA CGCCGCGACC
CTGGCCGAGA AGCTGGTGAA GCGGATCAGC CAGCCGTACC AGATATCCCG CCACGAGGTG
CGGATCTCGG CGAGCATCGG CATCGCGCTC TACCCCGGCG ACGGGCAGAC CCGCCACGAA
CTGATGATCA ATGCCGACGC GGCGATGTAT CACGCCAAGG ACCAGGGACG GAACGGCTAC
TGCTTCTTCG AGAGTTCGAT GAACGCCAAC GCCCAGGAAC AGTTGCAACT GCTCCATGAC
CTGCGCCAGG CCCTGGAGCG CCGGCAGTTG GTCTTGCACT ACCAACCCAA GGTACTGGCG
CCGAACGGAC CGATGGTCGG CGTGGAAGCG CTGCTGCGCT GGGAGCATCC GCAACACGGA
CTGATCCCCC CCGACCAGTT CCTGCCGCTG GCGGAAAAAA CCGGCCTGAT CGTGCAGATC
GGCGAGTGGG TGCTCGACGA AGCCTGCCGG CAGATGCGCC TCTGGCTGGA CGGCGGGCAT
GCGGAGTGGA ACATCGCGGT GAACCTTTCG GCCCTGCAGT TCGCCCATGC CGGCCTGGTC
GACTCGGTGC GCAACGCACT CCTGCGCCAC AGCCTGGAGC CCAGCCACCT GATCCTCGAG
GTGACCGAAT CGACCGCCAT GCGCGATGCC GATGCCAGCC TGGTGATCCT CGAGCAGTTG
TCGGCGATGG GCGTCGGCAT CTCCATCGAC GACTTCGGCA CCGGCTACTC CAGCCTGCTC
TATCTCAAGC GCCTGCCGGC GAGCGAACTG AAGATCGACC GTGGCTTCAT CAACGAGCTG
GCCCACGACA GCGACGACGC CGCGATCGTC TCGGCGATCG TCGCCCTCGG CCGCACGCTG
AACCTGAAGA TCGTCGCCGA GGGCGTGGAA ACCGAGGCCC AGCAGGAGTT CCTGACCCGC
CTCGGCTGCA ATTCGCTGCA AGGCTTCCTG CTCGGCAGGC CGATGCCGGC CGAGCAGTTG
CTCGCCAGCG TCGCCTGA
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| Protein sequence | MLISSYNQVL VAFSLIVAIL ASYTALDMAG RVTLAKGREA LSWLIGGAFA MGFGIWSMHF
VGMLAFSLPI PLGYDLGLTL LSLLLAVGSS AFALWLVCQA ELPWQRLALG ALLIGSGIAA
MHYTGMAALL MMPGIVYDPL WLGLSILIAV IASGAALWIA FRLRHGSRRI VLVRAGAALV
MGCAIVGMHY TGMAAAQFPL GSFCGAAGRG IDNGWLAVLV IVITLAVIAI ALIVSVLDSR
LEARTSVLAT SLARANRELI QLALHDNLTK LPNRMLLDDR LEQAIQQAIR DDRRFAVLFM
DLDGFKAVND AYGHHLGDLL LIEVAERIRA NVRAQDTIAR LGGDEFVLLI EAREPADAAT
LAEKLVKRIS QPYQISRHEV RISASIGIAL YPGDGQTRHE LMINADAAMY HAKDQGRNGY
CFFESSMNAN AQEQLQLLHD LRQALERRQL VLHYQPKVLA PNGPMVGVEA LLRWEHPQHG
LIPPDQFLPL AEKTGLIVQI GEWVLDEACR QMRLWLDGGH AEWNIAVNLS ALQFAHAGLV
DSVRNALLRH SLEPSHLILE VTESTAMRDA DASLVILEQL SAMGVGISID DFGTGYSSLL
YLKRLPASEL KIDRGFINEL AHDSDDAAIV SAIVALGRTL NLKIVAEGVE TEAQQEFLTR
LGCNSLQGFL LGRPMPAEQL LASVA
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