| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_40320 |
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| Symbol | xqhA |
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| ID | 4382358 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | - |
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| Start bp | 3601871 |
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| End bp | 3604201 |
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| Gene Length | 2331 bp |
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| Protein Length | 776 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639325802 |
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| Product | secretion protein XqhA |
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| Protein accession | YP_791371 |
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| Protein GI | 116049822 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1450] Type II secretory pathway, component PulD |
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| TIGRFAM ID | [TIGR02517] general secretion pathway protein D |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.386319 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCACGTT GTAGTACCCG TTCCGCCCAG CGCCTGTCTC CGCTGTTCCT GGTCCTGTCG
CTGGCCGTCC TCGGCCTGGC GCCGCCGGTC CATCCGGCAC CTGCCGCGAC TGCCGCCGCG
CAAGAGGAAG AGCAGTGGAC GATCAACATG AAGGATGCCG AGATCGGCGA CTTCATCGAG
CAGGTATCGA GCATCAGCGG CCAGACCTTC GTCGTCGATC CGCGGGTGAA GGGACGGGTC
ACGGTGGTAT CCCAGGCGCG GCTCAGCCTG GCGGAGGTCT ACCAACTGTT CCTTTCGGTG
CTCGCCACCC ATGGCTACGC GGTGCTGCCG CAGGGCGACC AGGCGCGTAT CGTGCCGAAC
ATGGAGGCAC GCCAGGACGC CGCGCAGAAG ACCGTCCGCG ATGGGCCGGG CAGCCTGGAG
ACGCGGGTGG TCCAGGCGCA GCAGACCTCG GTGGCGGAAC TGATCCCGAT GATCCGGCCG
CTGGTCCCGG CCCATGGCCA TCTGGCCGCC GTGCCGTCGG CCAACGCGCT GATCGTCAGC
GACCGCCGCG CCAACATCGA GCGCATCGAG GCGATCGTGC GCAGCCTCGA CCGGGCCGGC
GAACATGACT ACAGCATCTA CGACATGCGC CATGCCTGGG TCGCGGAAAT CGCCGAGGTG
CTCGATCGCA GCGTCACCCC GGCCGCCGGG AAGAGCGCCG CCACCGTCCA GGTCCTCGCC
GACAGCCGCA GCAACCGCCT GGTCCTGCTC GGGCCGCCGC AGGCGCGAGC GCGCTTGCTG
CGGCTGGCGC AGTCGCTCGA CGTCCCCTCG TCGCGGTCGG CGAACAGCCG GGTGATCCGC
CTGCGCCATG GCGACGCCAA GACCCTCGCC GCCACCCTCG GGGAGATCGG CGAATCGCTG
CGCGGCGAGC GGGGCCAGGA TGGACGGGGA AGCGGCAAGC GCGGCCTGCT GGTGCGCGCC
GACGAATCGC TGAATGCCCT GGTGATCCTC GCCGACCCGG AGGATGTCGG TCTGCTCGAG
GACATCGTCC GCCAGCTCGA CGTGCCGCGT GCGCAACTGT TGGTGGAGGC GGCGATCGTC
GAGCTGTCCG GCGAGATCGG CGACGCCCTC GGGGTGCAAT GGGCGCTGCG TAGCGGGCAT
GTCGCCGGCG GCGCTGGCTT CGCCGACAGC GGGTTGTCCA TCGGCACCCT GCTAGGCGCG
TTGCAGGCCG GCAAGCCGCC GGCAGAGCTG CCCGACGGTG CGATAGTCGG CCTCGGCAGT
CGCGATTTCG GCGCACTGGT CACCGCGCTG AGCCGCAATA GCCGCAGCAA CCTGCTGTCG
ACGCCGAGCC TGCTGACCCT GGACAACCAG AAGGCGGAAA TCCTGGTCGG CCAGAACGTG
CCGTTCCAGA CCGGCAGCTA CACCACCAGC GCCAGCGGTT CGAGCAATCC GTTCACCACT
GTCGAGCGCA AGGATATCGG GGTGACCCTC AAGGTCACGC CGCACATCGG CGAGGACCGC
ATGCTGCGCC TGGAGATCGA GCAGGAAATA TCCTCCATCG CGCCAACCGC CACCTTGGCG
GCGAAGGCGG TGGACCTGGT GACCAACAAG CGCTCGATCA AGAGCACCGT ACTGGCCGAC
GACGGCCAGG TCATCGTCCT CGGCGGACTG ATCCAGGACG ACCTGCTGCG CAGCGATTCG
CGGGTACCGC TGCTGGGCGA CATCCCCGGC GTCGGCCGGC TGTTCCGCTC GTCCCGCGAG
ACCCGGGTGA AGCGCAACCT GATGGTCTTC CTGCGACCGA GCATCGTCCG CGATGCCGCC
GGCCTGGAGC GCATCAGCCA TGGCCGTTAC CGTTCCATCC AGTTGCTGCG CGGTGCCGCC
GGCGAACCGG TACGCCCGCT GTTCGAGGAT GCCGGCGCCA TCGACCTGCG TCCCGCCGCC
CAGGTCGCAC CGGCACCTAT TGGCTCGCCG CGCAGCTATC CGGCTCCAGC CCCGGTGCTG
ATGGAGAAGC CGCGCCTGGC GGACCCGGCG TCCCTGGGCG ACGGTCGCGG CGGCGAGGTG
CTGGAGGTTC GCCAGGGCAC GCACGCGCCG CAGCCGCCGT CACCCCAGCG CTACGCCGTG
CGATTGGTCG AGGGCAGCAG CGAAGCCTTC ATGCGCGCGC TGATCGAGCG GCATCCGGGC
CTGTCGTTGC GTTTGCGCCG CGAACTGCGC GATGGCCAGG AGCTGTTCGC GGTGGAGCGG
GGCGACTACC TCGACCCGGA GCAGGCACGC CGGGCCCTGG CGGAACTGCC CGAAAGCCTG
CCGCGAGGGA AGGCGCGGGT GATTGCGCAT ACGCCGGGAA GCGCCCTGTG A
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| Protein sequence | MPRCSTRSAQ RLSPLFLVLS LAVLGLAPPV HPAPAATAAA QEEEQWTINM KDAEIGDFIE
QVSSISGQTF VVDPRVKGRV TVVSQARLSL AEVYQLFLSV LATHGYAVLP QGDQARIVPN
MEARQDAAQK TVRDGPGSLE TRVVQAQQTS VAELIPMIRP LVPAHGHLAA VPSANALIVS
DRRANIERIE AIVRSLDRAG EHDYSIYDMR HAWVAEIAEV LDRSVTPAAG KSAATVQVLA
DSRSNRLVLL GPPQARARLL RLAQSLDVPS SRSANSRVIR LRHGDAKTLA ATLGEIGESL
RGERGQDGRG SGKRGLLVRA DESLNALVIL ADPEDVGLLE DIVRQLDVPR AQLLVEAAIV
ELSGEIGDAL GVQWALRSGH VAGGAGFADS GLSIGTLLGA LQAGKPPAEL PDGAIVGLGS
RDFGALVTAL SRNSRSNLLS TPSLLTLDNQ KAEILVGQNV PFQTGSYTTS ASGSSNPFTT
VERKDIGVTL KVTPHIGEDR MLRLEIEQEI SSIAPTATLA AKAVDLVTNK RSIKSTVLAD
DGQVIVLGGL IQDDLLRSDS RVPLLGDIPG VGRLFRSSRE TRVKRNLMVF LRPSIVRDAA
GLERISHGRY RSIQLLRGAA GEPVRPLFED AGAIDLRPAA QVAPAPIGSP RSYPAPAPVL
MEKPRLADPA SLGDGRGGEV LEVRQGTHAP QPPSPQRYAV RLVEGSSEAF MRALIERHPG
LSLRLRRELR DGQELFAVER GDYLDPEQAR RALAELPESL PRGKARVIAH TPGSAL
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