Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_39300 |
Symbol | rbsR |
ID | 4385647 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 3498805 |
End bp | 3499818 |
Gene Length | 1014 bp |
Protein Length | 337 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639325722 |
Product | ribose operon repressor RbsR |
Protein accession | YP_791291 |
Protein GI | 116049900 |
COG category | [K] Transcription |
COG ID | [COG1609] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.00488223 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 0.347554 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGACAA TGAAGGACGT GGCGGCGATG GCGGGGGTTT CCTTCACCAC CGTATCGCAT GTGGTGAACA GGACGCGGCC GGTCAGCGAC GCGGTGCGCA AGAAGGTCGA GGACGCCATC GCGCAGCTGC ACTACGTGCC CAGCGCGGTG GCGCGCTCGC TGAAGGTGCG CACCACCTCG ATCATCGGCC TGCTGGTGCC GAACAGCACC AACCCGTATT TCGCCGAGCT GTCGCGGGGC ATCGAGGATT GCTGCGAGCG CAACGGCTAC TGCGTGATCC TCTGCAACTC CGACGACAAC CCGCAGAAGC AGGCCAACTA CCTGCGCGTG CTCCAGGAGA AACGCATCGA CGGCCTGGTC CTGGCGTCCG CCGGCGGCGA CGGCGCGCTG GCCAAGGGGC TGGCGAACAT GCGCACGCCG ACCGTGATCG TCGACCGCGA GGTGGAAGGC GTGGAAGCCG ACCGGGTGCA GATCGACCAT GAGATGGGCG CCTACCTGGC GACCCGCCAC CTGCTCGAAC TGGGCCATCG CGACATCGCC TGCATCGGCG GGCCGCTGTC GACCAAGGTC TCGACGCTGC GGGTCGAGGG CTACCGGCGG GCGATGGCCA AGGCCGGCCT GGAGGTGCGC CCGCAGTGGC TGCTGGAAAG CGAGTTCAGC AGCCCCGGCG GCTACCACGC GGCGCTCGGC CTGCTGGGCG GCGAGGGCGA GCGACCGACG GCGATCGTCG CCGGCAACGA CATGATCGGC ATCGGCGTGC TGCGCGCCGC GGCCGAGCTG AATATCAGGG TGCCGCACGA ACTGTCGGTG ATCGGCTTCG ACGATATCGA GCTGAGCCGC TTCGTGTTTC CCGCCTTGAC CACCGTGGGC CAGTCGATCC GCCTGCTCGG CGAGATCGCC GCGCAACTGC TGCTGCAACG CATCGCCGAG CGCGAGGAGC CGATGCAGCG GCGGGTGGTG GCGCCGGCGC TGATCCTGCG CGAATCCACC GCGCCGCCGC TGGTGCGGGT CTGA
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Protein sequence | MATMKDVAAM AGVSFTTVSH VVNRTRPVSD AVRKKVEDAI AQLHYVPSAV ARSLKVRTTS IIGLLVPNST NPYFAELSRG IEDCCERNGY CVILCNSDDN PQKQANYLRV LQEKRIDGLV LASAGGDGAL AKGLANMRTP TVIVDREVEG VEADRVQIDH EMGAYLATRH LLELGHRDIA CIGGPLSTKV STLRVEGYRR AMAKAGLEVR PQWLLESEFS SPGGYHAALG LLGGEGERPT AIVAGNDMIG IGVLRAAAEL NIRVPHELSV IGFDDIELSR FVFPALTTVG QSIRLLGEIA AQLLLQRIAE REEPMQRRVV APALILREST APPLVRV
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