Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_39280 |
Symbol | rbsK |
ID | 4385648 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 3497825 |
End bp | 3498751 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 639325721 |
Product | ribokinase |
Protein accession | YP_791290 |
Protein GI | 116049901 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0524] Sugar kinases, ribokinase family |
TIGRFAM ID | [TIGR02152] ribokinase |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.145597 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 0.325767 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGCGA AAGTACTGGT GGTGGGCAGC CTGAACATGG ACCTGGTAGT GCGCGCGCCG CGCCTGCCAC GGGGCGGCGA GACCCTCGCC GGGCAGTCCT TCACCACCAT TCCCGGCGGC AAGGGCGCCA ACCAGGCGGT CGCCGCGGCG CGTCTCGGCG CTGGGGTGGC GATGATCGGC TGCCTTGGCG ACGATGCCTA CGGCGACCAG TTGTACCGCG CGCTGCAGGC CGAGGGCATC GACTGCCAGG GCGTCGAGCG GGTGGCCGGG GAGTCCAGCG GGGTGGCGCT GATCGTGGTC GACGACAGCA GCCAGAACGC CATCGTCATC GTCGCCGGCG GCAACGGCCA CCTGTCGCCG GCCGTGCTGG CGCGCCACGA ACACTTGCTG GAGCAGGCGC AGGTGGTGGT CTGCCAGTTG GAAAGCCCGC TGGAGACGGT TGGCCATGTG CTGCGCCGGG CCCATGCGCT GGGCAAGACG GTGATCCTCA ACCCGGCGCC GGCCACCCGC GACGTGCCGG CGGACTGGCT GCCGCTGGTG GACTACCTGG TCCCCAACGA GACCGAAAGC GAACTGCTCT GCCGCCTGCC GGTGGACTCC CTGGAGAGCG CCGGACGTGC CGCCGAGCGC CTGCGCGAAA TGGGCGCCGG CAGGGTGATC GTCACCCTCG GCGCCCAGGG CGCCCTGCTG GTGGGCGAGG GGCGGGTCGA GCATTTCCCG GTGGCGCGGG TCAAGGCGCT GGATACCACG GCGGCCGGCG ACACCTTCGT CGGTGGCTTC GCCGCGGCCC TTGCGCGCGG CCTCGACGAG GCGGCGGCGA TCCGCTTCGG CCAGGCCGCC GCGGCGATCT CGGTGACCCG CCTCGGCGCG CAGACCTCGA TCCCCTCGCG CGAGGAAGTC GAGCGGGCGC TCGCTGGCGA GGCTTGA
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Protein sequence | MQAKVLVVGS LNMDLVVRAP RLPRGGETLA GQSFTTIPGG KGANQAVAAA RLGAGVAMIG CLGDDAYGDQ LYRALQAEGI DCQGVERVAG ESSGVALIVV DDSSQNAIVI VAGGNGHLSP AVLARHEHLL EQAQVVVCQL ESPLETVGHV LRRAHALGKT VILNPAPATR DVPADWLPLV DYLVPNETES ELLCRLPVDS LESAGRAAER LREMGAGRVI VTLGAQGALL VGEGRVEHFP VARVKALDTT AAGDTFVGGF AAALARGLDE AAAIRFGQAA AAISVTRLGA QTSIPSREEV ERALAGEA
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