Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_38580 |
Symbol | |
ID | 4380289 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 3441918 |
End bp | 3443309 |
Gene Length | 1392 bp |
Protein Length | 463 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639325666 |
Product | hypothetical protein |
Protein accession | YP_791235 |
Protein GI | 116049955 |
COG category | [E] Amino acid transport and metabolism [G] Carbohydrate transport and metabolism |
COG ID | [COG2610] H+/gluconate symporter and related permeases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.27646 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 60 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCGTGA TCATCGCCCT TGCCGCCCTG GGCCTGCTGA TGCTGGCCGC CTACCGGGGC TACAGCGTCA TCCTGTTCGC CCCCCTCGCC GCCCTCGGCG CCGTCCTGCT CACCGATCCC AGCGCGGTCG CGCCGACCTT CACCGGGGTG TTCATGGAGA AGATGGTCGG TTTCATCAAG CTCTACTTCC CGGTTTTCCT GCTTGGCGCG GTGTTCGGCA AGCTGATCGA GCTGGCCGGC TTCTCCCGCT CCATCGTCGC GGCGGCGATC CGCCTGCTCG GCACCCGCCA GGCGATGCTG GTGATCGTAC TGGTCTGCGC GCTGCTCACC TACGGCGGCG TCTCGCTGTT CGTGGTGGTG TTCGCGGTCT ACCCGTTCGC CGCGGAGATG TTCCGCCAGA GCGACATCCC CAAGCGGTTG ATTCCGGCGA CCATCGCCCT CGGCGCGTTT TCCTTCACCA TGGACGCGCT GCCCGGCACC CCGCAGATCC AGAACATCAT CCCCTCGACC TTCTTCGGCA CCCACGCCTG GGCCGCGCCC TGGCTCGGCA CCCTCGGCGC GCTGTTCGTC TTCGCCGTGG GCATGCTCTA CCTGCGACGC CAGGCGAACA AGGCGCGGCG CAACGGCGAA GGCTACGGCA GCGACCTGCG CAACGAGCCG GAGACCGCCG ATGACCTGCG CCTGCCGAAT CCCTGGCTGG CGCTCTCGCC GCTGGTGCTG GTCGGGGTCG CCAACCTGCT GTTCACCCAC TGGATCCCGC AATGGTACGG CCAGGTCCAT ACCCTGCAAC TGGCCGGCAT GGCCACGCCG TTGCAGACCG AGGTCGGCAA GCTCACCGCG ATCTGGGCAG TGCAGGCGGC CCTGCTGCTG GGCATCCTGC TGGTGCTGGC GAGCGGCTTC GCGGCGATCC GCAGCCGCCT CGCCGAAGGC ACCCGCAGCG CGGTGGCCGG CTCGCTGCTG GCGGCGATGA ACACCGCCTC GGAATACGGC TTCGGTGCGG TGATCGCCTC GCTGCCGGGC TTCCTGGTGC TGGCCGACGC GCTCAAGAGC ATTCCCAATC CGCTGGTCAA CGAAGCGATC ACCGTCACCC TGCTGGCCGG CATCACCGGT TCCGCGTCGG GCGGCATGAG CATCGCCCTG GCGGCGATGT CCGATACCTT CATCGCCGCC GCCAACGCCG CGCAGATCCC CCTGGAAGTC CTCCACCGGG TCGCCGCCAT GGCCAGCGGC GGGATGGATA CCCTGCCGCA CAACGGCGCG GTGATCACCC TCCTGGCGGT CACCGGCCTG ACCCATCGGG AGGCGTACAA GGACATTTTC GGCATTACCC TGATCAAGAC CCTGGCGGTG TTCTTCGTCA TCGGACTGTT CTACCCCACC GGCCTGGTCT GA
|
Protein sequence | MSVIIALAAL GLLMLAAYRG YSVILFAPLA ALGAVLLTDP SAVAPTFTGV FMEKMVGFIK LYFPVFLLGA VFGKLIELAG FSRSIVAAAI RLLGTRQAML VIVLVCALLT YGGVSLFVVV FAVYPFAAEM FRQSDIPKRL IPATIALGAF SFTMDALPGT PQIQNIIPST FFGTHAWAAP WLGTLGALFV FAVGMLYLRR QANKARRNGE GYGSDLRNEP ETADDLRLPN PWLALSPLVL VGVANLLFTH WIPQWYGQVH TLQLAGMATP LQTEVGKLTA IWAVQAALLL GILLVLASGF AAIRSRLAEG TRSAVAGSLL AAMNTASEYG FGAVIASLPG FLVLADALKS IPNPLVNEAI TVTLLAGITG SASGGMSIAL AAMSDTFIAA ANAAQIPLEV LHRVAAMASG GMDTLPHNGA VITLLAVTGL THREAYKDIF GITLIKTLAV FFVIGLFYPT GLV
|
| |