Gene PA14_38380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_38380 
Symbol 
ID4380304 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp3420889 
End bp3421521 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content67% 
IMG OID639325650 
Productputative transcriptional regulator 
Protein accessionYP_791219 
Protein GI116049970 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.0126427 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCAGGA AAACCAAAGA GGAATCCCAG AAAACCCGCG ATGGCATACT CGATGCCGCC 
GAGCGGGTTT TCCTGGAAAA GGGCGTGGGC ACCACTGCCA TGGCCGACCT GGCGGACGCC
GCCGGGGTTT CTCGCGGTGC GGTCTACGGC CACTACAAGA ACAAGATCGA GGTCTGTCTG
GCGATGTGCG ACCGCGCCTT CGGCCAGATC GAGGTACCCG ATGAAAACGC CAGGGTGCCG
GCGCTGGACA TCCTCCTGCG CGCCGGCATG GGCTTTCTCC GCCAGTGCTG CGAACCCGGT
TCGGTGCAGC GGGTGCTGGA GATCCTCTAC CTCAAGTGCG AACGCAGCGA CGAGAACGAG
CCGCTGCTGC GCCGCCGCGA GCTGCTCGAG AAGCAGGGGC AACGCTTCGG CCGACGGCAG
ATCCGCCGGG CGGTGGAGCG CGGCGAACTG CCGGCGCGGC TGGACGTCGA GCTGGCCAGC
ATCTATCTGC AATCGCTGTG GGACGGCATC TGCGGCACCC TGGCCTGGAC CGAGCGCTTG
CGCGACGATC CCTGGAGCCG CGCCGAACGC ATGTTCCGCG CCGGCCTCGA TAGCCTGCGC
AGTTCTCCCT ACCTCTTGCT GGCGGACGCC TGA
 
Protein sequence
MARKTKEESQ KTRDGILDAA ERVFLEKGVG TTAMADLADA AGVSRGAVYG HYKNKIEVCL 
AMCDRAFGQI EVPDENARVP ALDILLRAGM GFLRQCCEPG SVQRVLEILY LKCERSDENE
PLLRRRELLE KQGQRFGRRQ IRRAVERGEL PARLDVELAS IYLQSLWDGI CGTLAWTERL
RDDPWSRAER MFRAGLDSLR SSPYLLLADA