Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_37915 |
Symbol | |
ID | 4384133 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 3384617 |
End bp | 3386032 |
Gene Length | 1416 bp |
Protein Length | 471 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639325614 |
Product | major facilitator transporter |
Protein accession | YP_791183 |
Protein GI | 116054446 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.000756673 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.0508172 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGACGGACC GTGCCGCCCC TTCCAACTGG ATGCTCGCCC TGCTCGCCAG CGCGCAACTG ATCATCGCCC TCGACGCCAC CATCGTGTTC GTCGCCCTGC CGGAAATCAG CCGGGCGCTG GATTTCTCGG CGCAACGCCT GCAATGGGTG GTGAGCGCCT ATACGGTGGC CTTCGGCGGC TTCCTCCTGC TCGGCGGGCG CGCCACCGAC CTGCTCGGCC GGCGCCGCAT GTACGTCCTC GGGCAAAGCC TGTACGCCCT CGCCTCCCTC GCGGGCGGCC TGGCCCAGAG CGAGTTGCCG TTGATCCTCG CCCGCGCCGT GCAGGGCCTG GGTGGCGCGC TGCTGTTCCC GGCGACCCTG GCGCTGATCG GCAATCACTT CGCCGAGGGC CCGGCGCGCA ATCGTGCCCT GGCGATCTGG AGCATCGCCT CGGCGTTCGG CCTGGCCCTC GGTTCGGCGC TCGGCGGCGC GCTCACCGAG CTGTTCGGCT GGGCCTCGAT CTTCCTGGTC AACGTGCCGC TGGCCGGCGC CGCGGCGCTG CTCGCCCTGC GCCTGATCCC GGCCGACGCC CGGCGCCAGC GCGGTCGGCG CTTCGACCTG GCCGGCGCGC TGACGGTCAC CGCCGGCGCC ACCCTGCTGG TCTTCGCCCT GGTCCAGGGC CCCGAGTCGG GCTGGGATGC GCCCTCGGTA CGTTTCGGAC TTTACCTTTC CGTCCCGCTG CTACTGGCGT TCCTCGCCAT CGAACACTAC AGCCGCGACC CGCTGATGCC GCTGCGCCTG CTGGGCAACC GCAACCTGCA GGTGGCGATG CTGCTGACCG CGATCTTCAT GAGCAGCTAC GGCGTGCAGT ACTACTTCCT GGCCATCTAC TTCCAGTCGG TGTACGGCTA CAGCGTGTTG CAGACCGGCC TGGCGTTCCT CCCGGCGACT CTGCTCTGTA CCCTCGGTAT CCGCGTCGCC GAGCGCCTGC TGGCCCGCCA CGGGGCACGC GCGACGCTGG TCGCCGGCCT GCTGCTGGGC GCACTCGGGC TCGGCCTGCT GGCAGCGTGC CTGCCGCTGG GGCGCGGCTT CCTGGCGCTG CTGCCGGCCA TCGTGATCCT CAGCGTCGGC CAGGGCATGA CCTGGACCGC CATGTGGGTC AGCGCCGCCA GCGGCGTCGA TCCCGCCGAA CAGGGCGTCG CCTCGGGGAT GGCCTCGATG ACCCAGCAGA TCGGCGGCGC GCTCGGCCTG GCCCTGCTGG TGGCGCTGGC CAACGCCCAG GTGCGCGGCG CCGATGCCGC CAGCCTGCTG GCCAGCCAGG CGCGCGGCAT CGAATGGGTG ACCGCGCTCA GCGCCCTGCT CGCCCTGTTT GGCGCCGCCC TGGCCTTGCG TCTGCGCCGC GAGGAACCCG CGGCGTTGCA GCCGAGTCGC GGCTGA
|
Protein sequence | MTDRAAPSNW MLALLASAQL IIALDATIVF VALPEISRAL DFSAQRLQWV VSAYTVAFGG FLLLGGRATD LLGRRRMYVL GQSLYALASL AGGLAQSELP LILARAVQGL GGALLFPATL ALIGNHFAEG PARNRALAIW SIASAFGLAL GSALGGALTE LFGWASIFLV NVPLAGAAAL LALRLIPADA RRQRGRRFDL AGALTVTAGA TLLVFALVQG PESGWDAPSV RFGLYLSVPL LLAFLAIEHY SRDPLMPLRL LGNRNLQVAM LLTAIFMSSY GVQYYFLAIY FQSVYGYSVL QTGLAFLPAT LLCTLGIRVA ERLLARHGAR ATLVAGLLLG ALGLGLLAAC LPLGRGFLAL LPAIVILSVG QGMTWTAMWV SAASGVDPAE QGVASGMASM TQQIGGALGL ALLVALANAQ VRGADAASLL ASQARGIEWV TALSALLALF GAALALRLRR EEPAALQPSR G
|
| |