Gene PA14_37820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_37820 
Symbol 
ID4382353 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp3372115 
End bp3373338 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content69% 
IMG OID639325606 
Producthypothetical protein 
Protein accessionYP_791175 
Protein GI116050012 
COG category[S] Function unknown 
COG ID[COG3673] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.00268347 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.0937384 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGATC TCTCCCCCGA TTCCGCCTTG CCGCCTGCCG GCAGCGCCCA GGACAACGAC 
GCGCCGCGCC AGTTGGTGGT CTGCATCGAC GGAACCTCGA ACCGCTTCGG CGACCAGCCG
ACCAACGTGG TGCGCCTGTA CCGCTCGCTG TCGCGCGATC CGCGCAGGGT GCTGGCCTAC
TACGACCAAG GCGTCGGCAC CTTCGGCCTG AAGGAAACCC TGTTCGAGTG GCAGAAGTTT
CCCTCGCGGA TCGCCGGCCT GGCCTTCGGC TGGGGGCTCA AGCGCAACGT CGAGGGCGCC
TATCGCTTCC TCGCCGAGCA CTACCGGCCC GGCGACCAGA TATTCCTCTT CGGCTTTTCC
CGTGGCGCCT ACGCGGTGCG CGTGCTGGCC GCGATGCTGC GTGCGGTGGG CCTGATCGAT
GCGCACCAGC CGCACCTCTT CGACTACGCC TGGACCCTGC TCACCACCCG CATGCCGCCC
CGCGCCGAAG ACAAGCGGGC CGGCACGCGT CGCCGCGGGC CGGACTTCGG CCTGCTGGGA
CGCTTCCGCA AGGTCTTCGG CCGGCAGGTG AAGGTGCACT TCCTCGGCCT GTTCGACACC
GTGACCTCGG TGGGCTGGGT CTACGACCCG CTGACCGTGC CGTATTCCTC GAACAACGAA
ATGGTCGACG TGGTCCGCCA GGCCCTGGCC ATCGACGAAT GCCGCTGCTT CTTCCGGCAG
AACCTCTGGT TCGGCGAGAA GGACCGCAAG TCCGACGTGT TGCAGGTGTG GTTCCCCGGC
ATGCACTCCG ATGTCGGCGG TGGCTATGCG CCGAAGGACT CGCGGCTGGC CCTGGTGGCC
TTTACCTGGA TGCTCGGCGA GGCGCTGGAG GCCGGCCTGC ATGTCGACCC GGCGCGCAGC
CGCGACCAGT TGCGCGCACG TTCGAAGCAG GGCCCGGACC CGACCGCGCC GATCCTGCCG
GTGATGACCC GGCCCTGGCG CCTGGCCGAG TGGCTGCCGC TGCTGGTCTG GGACCGCCGC
AGCGGCAACC GCGCCTGGCG CTGGTCGCGT GGCCGGCCGC GCTCGCGGCC GCTGGAACCG
GTCGGGCAGG AAACCCGGGT CAAGCTGCAC CGTTCGGTGC AGCGGCGGCT GGACGAATGC
CCCGACTACC GGCCGTGCAA CCTGCCAGCG CTGGAACGCT GCGACCTCAT CGACGATTCG
CCGTTGCTTG ACGGCTACCG CTAG
 
Protein sequence
MDDLSPDSAL PPAGSAQDND APRQLVVCID GTSNRFGDQP TNVVRLYRSL SRDPRRVLAY 
YDQGVGTFGL KETLFEWQKF PSRIAGLAFG WGLKRNVEGA YRFLAEHYRP GDQIFLFGFS
RGAYAVRVLA AMLRAVGLID AHQPHLFDYA WTLLTTRMPP RAEDKRAGTR RRGPDFGLLG
RFRKVFGRQV KVHFLGLFDT VTSVGWVYDP LTVPYSSNNE MVDVVRQALA IDECRCFFRQ
NLWFGEKDRK SDVLQVWFPG MHSDVGGGYA PKDSRLALVA FTWMLGEALE AGLHVDPARS
RDQLRARSKQ GPDPTAPILP VMTRPWRLAE WLPLLVWDRR SGNRAWRWSR GRPRSRPLEP
VGQETRVKLH RSVQRRLDEC PDYRPCNLPA LERCDLIDDS PLLDGYR