Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_37250 |
Symbol | |
ID | 4385557 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 3317016 |
End bp | 3318287 |
Gene Length | 1272 bp |
Protein Length | 423 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639325563 |
Product | major facilitator transporter |
Protein accession | YP_791132 |
Protein GI | 116050054 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 57 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCTCG ACGCCGGCCC GGACGCTTCC CGGGACGGTC ATTTCGGCTG GTATCGCGCC CTCGACAAGC AGGAACGCCG GGCCTTCTGG AGCTGCAAGA TCGGCTACGG CCTGGACGGC ATGGACACCC AGATGCTGAG CTTCGTGATC CCCACCCTGA TCGCCCTGTG GGGGATCAGC ACCGGCGAAG CCGGCTTCAT CCACACCATG ACCCTGCTCG CCTCCGCCGC CGGCGGCTGG ATCGCCGGGA TCCTCTCCGA CCGCATCGGC CGGGTGCTGA CCCTGCAACT GACGGTGCTC TGGTTCGCCT TCTTCACCTT CCTCTGCGGC CTCGCGCAGA ACTACGAGCA GTTGCTGGTC GCGCGGACCC TGATGGGCTT CGGCTTCGGT GGCGAATGGA CCGCCGGCGC GGTACTCATC GGCGAAGTGA TCAAGGCCCG CGACCGCGGC AAGGCGGTCG GCCTGGTGCA GTCCGGCTGG GCCATCGGCT GGGGCCTCAC CGCCATCCTC TACTCGCTGA TGTTCAGCCT GCTGCCGCCG GAGGAGGCCT GGCGCGCGCT GTTCATGCTC GGCCTGTTGC CGGCACTGTT CGTCCTGGTG GTGCGTCGGC TGGTCAAGGA ACCGGCGATC TACCGCGAGG CCAGGCAGCG CAACCAGGGC GCCGACAAGG TCAGCTTCTA CGAGATCTTC GCCCCCGGGA TGCTCAGCAT CACCCTGCGC GCCTCGCTGC TGACCACCGG CGCCCTCGGC GGCTACTACG CCATCACCGC CTGGCTGCCG ACCTTCCTCA AGACCGAGCG CGGGCTGACC GTGCTCGGCA CCAGCGGCTA CCTGGCGATG GTGATCCTCG GCTCCTACGT CGGCTACGTG GTCAGTGCCT TCCTCACCGA CCTGATCGGG CGCAAGAAGA ACTTCGTCCT GTTCGCCGTC GGCTCCTTCA CCGTGGTCCT GCTCTACACC CAGTTGCCGG TAAGCAACGG CGCCATGCTC TGGCTCGGCT TCCCGCTCGG CTTCTTCGCC TCGGGCATCT TCAGCGGCAT GGGCTCGTTC CTCACCGAAC TGTTCCCGAC CCGCATCCGC GGCTCCGGCC AGGGCTTCTG CTACAACGCC GGGCGCGCCA TCGCCGCGCT GTTCCCGATG CTGATCGGCA TGCTCGGCCA GAAGCTCTCG CTGGGCCTGG GGATCGGCGC CTTCGCCGCG GTCTCCTACG GCGTGGTGAT CCTCGCCGCC CTCAGCCTGC CGGAAACCCG CGGCAAACAA CTGGAACTCT GA
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Protein sequence | MTLDAGPDAS RDGHFGWYRA LDKQERRAFW SCKIGYGLDG MDTQMLSFVI PTLIALWGIS TGEAGFIHTM TLLASAAGGW IAGILSDRIG RVLTLQLTVL WFAFFTFLCG LAQNYEQLLV ARTLMGFGFG GEWTAGAVLI GEVIKARDRG KAVGLVQSGW AIGWGLTAIL YSLMFSLLPP EEAWRALFML GLLPALFVLV VRRLVKEPAI YREARQRNQG ADKVSFYEIF APGMLSITLR ASLLTTGALG GYYAITAWLP TFLKTERGLT VLGTSGYLAM VILGSYVGYV VSAFLTDLIG RKKNFVLFAV GSFTVVLLYT QLPVSNGAML WLGFPLGFFA SGIFSGMGSF LTELFPTRIR GSGQGFCYNA GRAIAALFPM LIGMLGQKLS LGLGIGAFAA VSYGVVILAA LSLPETRGKQ LEL
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