Gene PA14_36980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_36980 
Symbol 
ID4385763 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp3293335 
End bp3293907 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content65% 
IMG OID639325543 
Producthypothetical protein 
Protein accessionYP_791112 
Protein GI116050074 
COG category[S] Function unknown 
COG ID[COG3652] Predicted outer membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.0430291 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGAAGT CCCGGCATTT TTTCCCTGTC ACGCCAACGG AGTCGACCAT GAACAGAGCA 
ATCAGCCTTC CCCTCAAGGG AGCCGCCTGG CTCCTGCTGG TCCTGGCCCT GCCTTTCGCC
AACGCCCAGG ACATGAACAA GACCGCGCCA CAGACCTTCG TCAGCGAGGC CTCGGCGGCC
GGCGTGGCGG AAATCGAAGC CGGCAAGATG GCGCTGGAAA AGAGCACCGC CGCCGATGTG
AAGGTATTCG CCAAGCAGAT GATCGACGAC CACGGCAAGG TCAACGCCGA ACTGCGCAGC
CTGGCCGAGC GCAAGAAACT GGAGGTCGAA GACGACGCCA GCCTGACCGA CAAGGCCAAG
GCGACCCTGC TCGACCTGCG CGACGCCTCC TTCGACCCGG CCTACGCCAA CAACCAGGTG
GCGGCCCACG AGAAAGCCGT GGAACTCTTC ACCCAGGCCG CAGACAACCT CACCGACCCG
GAACTGCAGG CCTTCGCCAA GACCCACCTG CCGGCCCTGA AGCACCACCT GGAAATGGCC
CGCGCGCTGG CCAAGGCGCA CCCATCCAAG TAA
 
Protein sequence
MPKSRHFFPV TPTESTMNRA ISLPLKGAAW LLLVLALPFA NAQDMNKTAP QTFVSEASAA 
GVAEIEAGKM ALEKSTAADV KVFAKQMIDD HGKVNAELRS LAERKKLEVE DDASLTDKAK
ATLLDLRDAS FDPAYANNQV AAHEKAVELF TQAADNLTDP ELQAFAKTHL PALKHHLEMA
RALAKAHPSK