Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_36090 |
Symbol | |
ID | 4380344 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 3215363 |
End bp | 3216613 |
Gene Length | 1251 bp |
Protein Length | 416 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639325468 |
Product | putative porin |
Protein accession | YP_791037 |
Protein GI | 116050146 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.000000105785 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACCCGTT CCGCTCCGAA CCTGCTGAAA TCCGCCTCGC TCGCCCCGGT CCTGCTGGCC GGCCTGCCGT CGCTCGCCGG CGCCGAGGGC TTTATCGAAG ACGCCAGCGT CAGCCTCGGC CTGCGCAATC TCTATTTCAA TCGCGACTTC CGCCAGCCCG GCGCGGCGCA GTCGAAACAG GAGGAGTGGG CCCAAGGCTT TCTCCTACAG GCAAAATCCG GCTATACCCA GGGCACCCTG GGCCTCGGCG TCGAGCTGAT CGGCCAGCTC GGCCTGAAGC TCGACAGCAG CCCTGATCGT GCCGGCTCCG GGCTGCTGCC ACGCCACGCC GACGGACGCG CAGCGGACGA CTACGCGCGA CTGGGCGTGG CGCCGAAGCT GAAGCTGTCG AATACCGAGC TGAAGCTCGG CGAACTGCTG CCGGAACTGC CAATCCTCCT GCGCAACGAC GGCCGCCTGC TGCCACAGAC CTTCCAGGGC GGCATGCTGA CCTCCAGGGA AATCGCCGGC CTGACCCTGC ACGGCGGGCA GATGCGTTCG CTCAGCCAGC GCAACTCCAG CGACCACCAG GACCTCTCGG TGGATGGGCG CGGCGGGGTG TTCTCCGACC GTTTCGACTA CCTGGGCGCG GAGTACCGCT TCAATGCCGA GCGCAGCCAG GTCGGGCTGT GGCAGGCGCG ACTGCAAGAC ATCTACCGGC AGGACTACTA CAGCTTGAGC CACAAGCAGA GCTTCGGCGG CTGGCGCCTG GGCGCCAGCG TCGGGCTCTT CGACACGCGC GACGAAGGTG CCGCGAAGCT CGGTGATCTG GAGAATCGCG CGCTGACCGG TTTCTTCAGC GCGACCCGCG GCCGCCACAG CCTCGGCGCC GGCTACCAGC GCATGTACGG CGACGACGGG ATGCTCTACA TCGCCGGCAC CAGCACGCCG TTGGTCAACG ACATCCAGGT GCGCAACTTC ACCAGCGCCG GCGAGCGCTC CTGGCAACTG CGCTACGACT ACGACTTCGT CGCCCTGGGC ATTCCCGGGC TGACCGCCAT GGCCCGCTAC GCCAGCGGCG CCCATGCCCG GACGAAGGCG ATGGACGACG GCCGCGCCTG GGAACGCGAC GTGGACGTCG CCTACGTGAT CCAGAGCGGC CCGCTGAAGA ACCTCGGCCT GCGTTGGCGC AACGCCATGC TGCGGTCCAA CCATGCCGCC GATGTCGACG AGAACCGCCT GATCCTCTCG TATTCCCTGC CGCTGCTCTG A
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Protein sequence | MTRSAPNLLK SASLAPVLLA GLPSLAGAEG FIEDASVSLG LRNLYFNRDF RQPGAAQSKQ EEWAQGFLLQ AKSGYTQGTL GLGVELIGQL GLKLDSSPDR AGSGLLPRHA DGRAADDYAR LGVAPKLKLS NTELKLGELL PELPILLRND GRLLPQTFQG GMLTSREIAG LTLHGGQMRS LSQRNSSDHQ DLSVDGRGGV FSDRFDYLGA EYRFNAERSQ VGLWQARLQD IYRQDYYSLS HKQSFGGWRL GASVGLFDTR DEGAAKLGDL ENRALTGFFS ATRGRHSLGA GYQRMYGDDG MLYIAGTSTP LVNDIQVRNF TSAGERSWQL RYDYDFVALG IPGLTAMARY ASGAHARTKA MDDGRAWERD VDVAYVIQSG PLKNLGLRWR NAMLRSNHAA DVDENRLILS YSLPLL
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