Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_35670 |
Symbol | pslG |
ID | 4382116 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 3170054 |
End bp | 3171382 |
Gene Length | 1329 bp |
Protein Length | 442 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639325430 |
Product | putative glycosyl hydrolase |
Protein accession | YP_790999 |
Protein GI | 116050184 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3664] Beta-xylosidase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.00000000000648928 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGGCACGTA AGGGACTCTA TCTGGGCGGC AGCGCGCTGC TGCTCGCCGT GGTACTGCTG CTGGTGTTCT GGGGGCGTCC CGCGGACGCC GAGATCCAGG TACTGAAGGC GCCTCGCGCG GTGGTCTGGA AAGACTTCCT CGGGGTCAAC GCGCAGTTCC TCTGGTTCAG CCCGGAGCGC TACAACAAGC AGATCGACCG CCTGCAGGAC CTGGGGCTGG AGTGGGTGCG CCTGGACCTG CACTGGGACC GCCTGGAAAC CGCCGAAGAC CAGTACCAGC TGGCCTCCCT CGACCAGTTG GTCAAGGATC TCGAGGCGCG CCAGCTGAAG TCGGTGTTCT ACCTGGTCGG ATCGGCCCGC TTCATCACCA CCGCGCCGTT CTATTCGCCC TTCCAGGACC AGTATCCGCC GCGCGACCCG GAAGTCTTCG CCCGGCGCAT GGCGATGCTC TCGCAGCGCT ACCCGAGCGT GGCCGCCTGG CAGGTATGGA ACGAGCCCAA CCTGATCGGC TTCTGGCGGC CCAAGGCCGA TCCGGAAGGC TACGCCAAGC TGCTCCAGGC CAGCACCATC GCCCTGCGCA TGGTCGACCC GGAGAAGCCG GTGGTTTCCG CCGGCATGGC CTTCTTCAGC GAGATGCCCG ACGGCCGCAC CATGTTCGAT GCCCTCGGCC ACCTGGGCGT GGAGAGCCTC GGCACCATCG CCACCTACCA CCCCTATACC CAGTTGCCGG AAGGCAACTA CCCGTGGAAC CTGGACTTCG TCTCCCACGC CAACCAGATC AACCGCGCCC TGCGCAACGC CGGCGTGCCG GCGATCTGGA GCACCGAGTG GGGCTGGTCG GCCTACAAGG GGCCGAAGGA GTTGCAGGAC ATCATTGGCG TCGAAGGCCA GGCCGACTAC GTGCTGCGTC GCCTGGCGCT GATGAGTGCG CTGGACTACG ACCGGATCTT CCTCTTCACC CTCAGCGATC TCGACCAGCG CGCCAGCGTG CGCGACCGCG ACTACGGCCT GCTCGACCTG GACGCCAACC CCAAGCCGGT CTACCTGGCC CTGCAACGCT TCCTCAAGGT CACCGGGCCG AAGCTGCGCC CGGCCGACCC GCCGGTCACC GAGGACCTGC CCGACGGTTC CTTCAGCATC GGCTGGACCC GCGAGGACGG TCGCAACGTC TGGCTGTTCT GGTCGGCCCG CGGCGGCAAC GTGCGCCTGC CGAAGCTCAA GGAGGCCACC CTGCACGATC CGCTCAGCGG CAAGGTCACG CCCTTGAGCG GCAGCGACGG CCTGGAAGTC CCGGTGAAGT CCAGCCTGCA GATGCTGGTC TGGGAGTGA
|
Protein sequence | MARKGLYLGG SALLLAVVLL LVFWGRPADA EIQVLKAPRA VVWKDFLGVN AQFLWFSPER YNKQIDRLQD LGLEWVRLDL HWDRLETAED QYQLASLDQL VKDLEARQLK SVFYLVGSAR FITTAPFYSP FQDQYPPRDP EVFARRMAML SQRYPSVAAW QVWNEPNLIG FWRPKADPEG YAKLLQASTI ALRMVDPEKP VVSAGMAFFS EMPDGRTMFD ALGHLGVESL GTIATYHPYT QLPEGNYPWN LDFVSHANQI NRALRNAGVP AIWSTEWGWS AYKGPKELQD IIGVEGQADY VLRRLALMSA LDYDRIFLFT LSDLDQRASV RDRDYGLLDL DANPKPVYLA LQRFLKVTGP KLRPADPPVT EDLPDGSFSI GWTREDGRNV WLFWSARGGN VRLPKLKEAT LHDPLSGKVT PLSGSDGLEV PVKSSLQMLV WE
|
| |