Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_35530 |
Symbol | bkdA1 |
ID | 4384412 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 3158396 |
End bp | 3159628 |
Gene Length | 1233 bp |
Protein Length | 410 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639325420 |
Product | 2-oxoisovalerate dehydrogenase (alpha subunit) |
Protein accession | YP_790989 |
Protein GI | 116050194 |
COG category | [C] Energy production and conversion |
COG ID | [COG1071] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.502402 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.000746656 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGTGATT ACGAGCCGTT GCGTCTGCAT GTCCCGGAGC CCACGGGGCG TCCTGGCTGC AAGACCGACT TTTCCTATCT GCACCTGTCC CCCGCCGGCG AGGTACGCAA GCCGCCGGTG GATGTCGAGC CCGCCGAGAC CAGCGACCTG GCCTACAGCC TGGTACGCGT GCTCGACGAC GACGGCCACG CCGTCGGTCC CTGGAATCCG CAGCTCAGCA ACGAACAACT GCTGCGCGGC ATGCGGGCGA TGCTCAAGAC CCGTCTGTTC GACGCGCGCA TGCTCACCGC GCAACGGCAG AAAAAGCTTT CCTTCTATAT GCAATGCCTC GGCGAGGAAG CCATCGCCAC CGCCCACACC CTGGCCCTGC GCGACGGCGA CATGTGCTTC CCGACCTATC GCCAGCAAGG CATCCTGATC ACCCGCGAAT ACCCGCTGGT GGACATGATC TGCCAGCTTC TCTCCAACGA GGCCGACCCG CTCAAGGGCC GCCAGCTACC GATCATGTAC TCGAGCAAGG AGGCCGGTTT CTTCTCCATC TCCGGCAACC TCGCCACCCA GTTCATCCAG GCGGTCGGCT GGGGCATGGC CTCGGCGATC AAGGGCGACA CGCGCATCGC CTCGGCCTGG ATCGGCGACG GCGCCACCGC CGAGTCGGAC TTCCACACCG CCCTCACCTT CGCCCATGTC TACCGCGCGC CGGTAATCCT CAACGTGGTC AACAACCAGT GGGCGATCTC CACCTTCCAG GCCATCGCCG GCGGCGAAGG CACCACCTTC GCCAACCGTG GCGTGGGCTG CGGGATCGCC TCGCTGCGGG TCGACGGCAA TGACTTCCTG GCGGTCTACG CCGCCTCCGA GTGGGCCGCC GAGCGCGCCC GGCGCAACCT CGGGCCGAGC CTGATCGAAT GGGTCACCTA CCGCGCCGGC CCGCACTCGA CTTCGGACGA CCCGTCCAAG TACCGCCCCG CCGACGACTG GACCAACTTC CCGCTGGGCG ACCCGATCGC CCGCCTGAAG CGGCACATGA TCGGCCTCGG CATCTGGTCG GAGGAACAGC ACGAAGCCAC CCACAAGGCC CTCGAAGCCG AAGTACTGGC CGCGCAGAAA CAGGCGGAGA GCCATGGCAC CCTGATCGAC GGCCGGGTGC CGAGCGCCGC CAGCATGTTC GAGGACGTCT ATGCAGAACT GCCGGAGCAC CTGCGCCGGC AACGCCAGGA GCTCGGGGTA TGA
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Protein sequence | MSDYEPLRLH VPEPTGRPGC KTDFSYLHLS PAGEVRKPPV DVEPAETSDL AYSLVRVLDD DGHAVGPWNP QLSNEQLLRG MRAMLKTRLF DARMLTAQRQ KKLSFYMQCL GEEAIATAHT LALRDGDMCF PTYRQQGILI TREYPLVDMI CQLLSNEADP LKGRQLPIMY SSKEAGFFSI SGNLATQFIQ AVGWGMASAI KGDTRIASAW IGDGATAESD FHTALTFAHV YRAPVILNVV NNQWAISTFQ AIAGGEGTTF ANRGVGCGIA SLRVDGNDFL AVYAASEWAA ERARRNLGPS LIEWVTYRAG PHSTSDDPSK YRPADDWTNF PLGDPIARLK RHMIGLGIWS EEQHEATHKA LEAEVLAAQK QAESHGTLID GRVPSAASMF EDVYAELPEH LRRQRQELGV
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