Gene PA14_35530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_35530 
SymbolbkdA1 
ID4384412 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp3158396 
End bp3159628 
Gene Length1233 bp 
Protein Length410 aa 
Translation table11 
GC content67% 
IMG OID639325420 
Product2-oxoisovalerate dehydrogenase (alpha subunit) 
Protein accessionYP_790989 
Protein GI116050194 
COG category[C] Energy production and conversion 
COG ID[COG1071] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.502402 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.000746656 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGTGATT ACGAGCCGTT GCGTCTGCAT GTCCCGGAGC CCACGGGGCG TCCTGGCTGC 
AAGACCGACT TTTCCTATCT GCACCTGTCC CCCGCCGGCG AGGTACGCAA GCCGCCGGTG
GATGTCGAGC CCGCCGAGAC CAGCGACCTG GCCTACAGCC TGGTACGCGT GCTCGACGAC
GACGGCCACG CCGTCGGTCC CTGGAATCCG CAGCTCAGCA ACGAACAACT GCTGCGCGGC
ATGCGGGCGA TGCTCAAGAC CCGTCTGTTC GACGCGCGCA TGCTCACCGC GCAACGGCAG
AAAAAGCTTT CCTTCTATAT GCAATGCCTC GGCGAGGAAG CCATCGCCAC CGCCCACACC
CTGGCCCTGC GCGACGGCGA CATGTGCTTC CCGACCTATC GCCAGCAAGG CATCCTGATC
ACCCGCGAAT ACCCGCTGGT GGACATGATC TGCCAGCTTC TCTCCAACGA GGCCGACCCG
CTCAAGGGCC GCCAGCTACC GATCATGTAC TCGAGCAAGG AGGCCGGTTT CTTCTCCATC
TCCGGCAACC TCGCCACCCA GTTCATCCAG GCGGTCGGCT GGGGCATGGC CTCGGCGATC
AAGGGCGACA CGCGCATCGC CTCGGCCTGG ATCGGCGACG GCGCCACCGC CGAGTCGGAC
TTCCACACCG CCCTCACCTT CGCCCATGTC TACCGCGCGC CGGTAATCCT CAACGTGGTC
AACAACCAGT GGGCGATCTC CACCTTCCAG GCCATCGCCG GCGGCGAAGG CACCACCTTC
GCCAACCGTG GCGTGGGCTG CGGGATCGCC TCGCTGCGGG TCGACGGCAA TGACTTCCTG
GCGGTCTACG CCGCCTCCGA GTGGGCCGCC GAGCGCGCCC GGCGCAACCT CGGGCCGAGC
CTGATCGAAT GGGTCACCTA CCGCGCCGGC CCGCACTCGA CTTCGGACGA CCCGTCCAAG
TACCGCCCCG CCGACGACTG GACCAACTTC CCGCTGGGCG ACCCGATCGC CCGCCTGAAG
CGGCACATGA TCGGCCTCGG CATCTGGTCG GAGGAACAGC ACGAAGCCAC CCACAAGGCC
CTCGAAGCCG AAGTACTGGC CGCGCAGAAA CAGGCGGAGA GCCATGGCAC CCTGATCGAC
GGCCGGGTGC CGAGCGCCGC CAGCATGTTC GAGGACGTCT ATGCAGAACT GCCGGAGCAC
CTGCGCCGGC AACGCCAGGA GCTCGGGGTA TGA
 
Protein sequence
MSDYEPLRLH VPEPTGRPGC KTDFSYLHLS PAGEVRKPPV DVEPAETSDL AYSLVRVLDD 
DGHAVGPWNP QLSNEQLLRG MRAMLKTRLF DARMLTAQRQ KKLSFYMQCL GEEAIATAHT
LALRDGDMCF PTYRQQGILI TREYPLVDMI CQLLSNEADP LKGRQLPIMY SSKEAGFFSI
SGNLATQFIQ AVGWGMASAI KGDTRIASAW IGDGATAESD FHTALTFAHV YRAPVILNVV
NNQWAISTFQ AIAGGEGTTF ANRGVGCGIA SLRVDGNDFL AVYAASEWAA ERARRNLGPS
LIEWVTYRAG PHSTSDDPSK YRPADDWTNF PLGDPIARLK RHMIGLGIWS EEQHEATHKA
LEAEVLAAQK QAESHGTLID GRVPSAASMF EDVYAELPEH LRRQRQELGV