Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_35190 |
Symbol | pbpC |
ID | 4380379 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 3129531 |
End bp | 3131228 |
Gene Length | 1698 bp |
Protein Length | 565 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639325395 |
Product | penicillin-binding protein 3A |
Protein accession | YP_790964 |
Protein GI | 116050219 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0768] Cell division protein FtsI/penicillin-binding protein 2 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAGTC AACGCCGAAA CTACCGCTTC ATCCTTGTCG TCACCCTGTT CGTCCTCGCC TCCCTGGCCG TCTCCGGACG GTTGGTCTAT CTCCAGGTCC ACGACCACGA ATTCCTCGCC GACCAGGGCG ACCTCCGCTC GATCCGCGAC CTACCGATCC CGGTCACCCG CGGCATGATC ACCGACCGCA ACGGCGAGCC GCTGGCGGTA TCCACCGAAG TCGCGTCGAT CTGGTGCAAC CCCAGGGAAA TGGCCGCCCA CCTCGACGAG GTGCCACGCC TGGCCGGCGC CCTGCACCGC CCCGCGGCGC CGCTGCTGGC CCAGCTCCAG GCCAACCCGA ACAAGCGCTT CCTCTACCTC GAGCGCGGCC TGTCGCCGAT CGAGGCCAGC GAGGTGATGG CCCTGGGCAT AACGGGGGTA CACCAGATCA AGGAATACAA GCGTTTCTAC CCCAGTTCCG AGCTGACCGC GCAGTTGATC GGCCTGGTCA ACATCGACGG CCGCGGCCAG GAAGGCACCG AACTGGGCTT CAACGACTGG CTGAGCGGCA AGGACGGAGT ACGCGAGGTG GCGATCAACC CGCGCGGCTC GCTGGTCAAC AGCATCAAGG TGCTGAAGAC GCCCAAGGCC AGCCAGGACG TGGCCCTGAG CATCGACCTG CGACTACAGT TCATCGCCTA CAAGGCGCTG GAAAAGGCCG TGCTCAAGTT CGGCGCACAC TCCGGCTCGG CGGTCCTGGT GAACCCGAAG AGCGGGCAGA TCCTGGCGAT GGCCAACTTC CCCTCCTACA ACCCGAACAA CCGCGCCAGC TTCGCCCCGG CCTTCATGCG CAACCGCACC CTCACCGATA CCTTCGAGCC GGGCTCGGTG ATCAAGCCGT TCAGCATGTC GGCGGCGCTG GCCTCCGGCA AGTTCGACGA GAACAGCCAA GTCAGCGTGG CACCGGGCTG GATGACCATC GACGGGCACA CCATCCACGA CGTCGCCCGG CGCGACGTAC TGACCATGAC CGGGGTGCTG ATCAACTCCT CGAACATCGG CATGAGCAAG GTCGCCCTGC AGATCGGACC CAAGCCGATC CTCGAACAGC TCGGCCGGGT CGGTTTCGGC GCGCCGCTGT CGCTGGGCTT CCCCGGCGAG AACCCGGGCT ACCTGCCGTT CCACGAGAAA TGGTCGAACA TCGCCACCGC CAGCATGTCG TTCGGCTACA GCCTGGCGGT GAACACCGCC GAGCTGGCCC AGGCCTACTC GGTGTTCGCC AACGACGGCA AGCTGGTGCC GCTCAGCCTG CTCCGCGACA ACCCGCAGAA CCAGGTGCGC CAGGCGATGG ACCCGCAGAT CGCACGGCGC ATCCGGGCGA TGCTGCAAAC CGTGGTAGAA GACCCGAAGG GCGTGGTCCG CGCCCGCGTG CCGGGCTACC ACGTGGCGGG CAAGAGCGGC ACCGCGCGCA AGGCCTCGGG CCGGGGCTAC GCGGACAAGT CCTACCGTTC GCTGTTCGTC GGCATGGCGC CGGCGTCCGA CCCGCAACTG GTGCTGGCGG TGATGATCGA TTCGCCGACC AGGATTGGCT ACTTCGGCGG CCTGGTCTCG GCGCCCACCT TCAGCGACAT CATGGCCGGA TCGCTACGCG CCCTGGCGAT CCCGCCGGAC AACCTGCAGG ACAGCCCGGC CGTCGCCGAC CGCCAGCACC ACGGCTGA
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Protein sequence | MSSQRRNYRF ILVVTLFVLA SLAVSGRLVY LQVHDHEFLA DQGDLRSIRD LPIPVTRGMI TDRNGEPLAV STEVASIWCN PREMAAHLDE VPRLAGALHR PAAPLLAQLQ ANPNKRFLYL ERGLSPIEAS EVMALGITGV HQIKEYKRFY PSSELTAQLI GLVNIDGRGQ EGTELGFNDW LSGKDGVREV AINPRGSLVN SIKVLKTPKA SQDVALSIDL RLQFIAYKAL EKAVLKFGAH SGSAVLVNPK SGQILAMANF PSYNPNNRAS FAPAFMRNRT LTDTFEPGSV IKPFSMSAAL ASGKFDENSQ VSVAPGWMTI DGHTIHDVAR RDVLTMTGVL INSSNIGMSK VALQIGPKPI LEQLGRVGFG APLSLGFPGE NPGYLPFHEK WSNIATASMS FGYSLAVNTA ELAQAYSVFA NDGKLVPLSL LRDNPQNQVR QAMDPQIARR IRAMLQTVVE DPKGVVRARV PGYHVAGKSG TARKASGRGY ADKSYRSLFV GMAPASDPQL VLAVMIDSPT RIGYFGGLVS APTFSDIMAG SLRALAIPPD NLQDSPAVAD RQHHG
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