| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_34990 |
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| Symbol | |
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| ID | 4385328 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | + |
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| Start bp | 3114399 |
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| End bp | 3116519 |
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| Gene Length | 2121 bp |
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| Protein Length | 706 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639325378 |
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| Product | putative TonB-dependent receptor |
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| Protein accession | YP_790947 |
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| Protein GI | 116050236 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.275223 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 0.836539 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGTCCC GACCCCGTCC CAGCTTCGTC TCCCACCTGT TGCCCGGCTC CCTCGCGCTC
TGCGGCCTGG CCATCGCCTG CGCCGTCCAG GGCGAGGAGC GACGCAGCCT CGAACCCATG
GTGGTGACCG GCAGCTACAA CCCCAGCGAC ACCTTCGACC TGCCGTTCTC GGTGGATAGC
ATCGAGCGCC GGCAGATCGC CGACGGCCAG CTCGGCATCA ACCTCTCCGA AGTCCTGCCG
CGGGTACCCG GCCTGGTGGT GCAGAACCGC CAGAACTACG CCCAGGACCT GCAAATCTCC
TCGCGCGGCT ACGGCGCCCG CTCGGCCTTC GGTATCCGCG GGCTGAAGCT GCTCGCCGAC
GGCATCCCGG CCAGCACGCC GGATGGCCAG GGCCAGGCCG CGACCCTCAA CCTCGACGTC
GCCGAGCGCA TCGAGGTACT GCGCGGGCCG GCCTCGACGA TCTACGGCAG CAACGCCGGC
GGGGTGATCC AGATGTTCTC CCGCGACGGC CAGGGCGCCC CGCGGGTCGG CGCGGAAACC
ACCGTCGGCA GCGATGGCCT GAGCCGCAAC CACCTGTACA CGGAAGGCGA GGGCGACGGG
GTCGGTTTCC TGGTGGATGC TTCGCGGATG GACACCGACG GCTACCGCGA CCACAGCGCC
GCGCGCCGCG ACCAGACCTT CGCCAAGCTC AACTTCAGGC CCGACGCCGA CAGCCGCCTG
GCGCTGATCT ACAGCAGCCT GGAACAGAAC GACACTGAAG ATCCGCTGGG GCAGACCTGG
GACGCCTACA AGCACGACCC GCGCTCCGTC ACCGCCAACG CCGAGCTGTA CGACACGCGC
AAGAGCATCG ACCACCAGCA GGCCGGGATG AACTACGAGC GCTACTTCGG CGAGGCGACC
TTGCAGGTCA ACGCCTACGT GGGCAAGCGC AGTGTCGTGC AGTACCTGTC GATCCCCAAG
GGGGTGGTCT CCAACAGTCA GCGTGGCGGC GGCGTGGTGG ACTTCGACCG CGACTTCCAC
GGCGGCACCG TGCGCTGGCT GCAACCGGTA CGCCAGGCGC CGGGCGAGCT GAACCTGACC
GTCGGCCTCG ACTACGACCA GAGCCGCGAC GACCGTCGCG GCTACCAGAA CTTCAACGGC
GACCAGCTCG GCGTGAAGGG CGAGTTGCGC CGCGACGAGG TGGACACCGC CACCAGCCTC
GATCCCTACC TGCAGGCGAG CTGGGCCATC GACGCCTGGA CCCTGCAGGC CGGGGTGCGC
CACAGCACCA TGAAGATGGA GGTCGACGAC CGCTACTTGA GCAACGGCGA TGCCAGCGGC
TCGCGGCGCT ACCGGAAGAA CACCCCGTCG TTCTCGGTGA TGTACGCCTT CACCCCCGAC
CTGCACGGCT ACCTCAGCGC CGGCAAGGGC TTCGAGACCC CGACCCAGGC GGAGATGGCC
TATGCGCCGG TGGCGGCGAA CGCGCCGGAC GTCTTCAACT TCGGCCTCAA GCCGGCCACC
AGCAGCCAGT ACGAAGCCGG TCTGAAGGCG CGCCTGTGGG GCAATACGCG GGTCAACGCG
GCGATCTTCC AGATCCGCAC CGAGGACGAG ATCGTCGTCG CCAGCTCCCT CGGCGGTCGC
ACCAGCTACC AGAACGCCGG CAAGACCCTG CGCCGCGGCT TCGAACTGGG CGTGGAGAGC
GAACTGAGCG AGCACTGGAA CGCCAACCTG GCCTATACCC GGCTATCCGC CACCTACGAT
TCGGATTTCG AGGCCGGCGG CAAGACCATC GGCAAGGGCA AGCACCTGCC GGGCGTGCCG
GCAAGCAGCC TGTTCGGCGA ACTGGTATGG AAGCCCGTGG AGGGCATCAG CATGGGCTGG
GAAGGCATGT ACCGCAGCCA GGTCTACGTC GAGGACAGCA ACAGCGAAAA GGCCGCGCCG
AGCTATGCGG TATTCAACTG GCGCACCCGC TTCGAACAGC GCCTGGGGGC CTGGACCTTC
CACCAGCTGG TGCGCCTGGA CAACCTGTTC GACCGCCAGT ACGTCGGCTC GGTCATCGTC
GGCGACGGCA ACCGGCGTTA CTACGAAGCG GCCCCCGGGC TGTCCTGGTA CGCGGGAGCC
GGGGTCGAAT ACCAGTTCTG A
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| Protein sequence | MPSRPRPSFV SHLLPGSLAL CGLAIACAVQ GEERRSLEPM VVTGSYNPSD TFDLPFSVDS
IERRQIADGQ LGINLSEVLP RVPGLVVQNR QNYAQDLQIS SRGYGARSAF GIRGLKLLAD
GIPASTPDGQ GQAATLNLDV AERIEVLRGP ASTIYGSNAG GVIQMFSRDG QGAPRVGAET
TVGSDGLSRN HLYTEGEGDG VGFLVDASRM DTDGYRDHSA ARRDQTFAKL NFRPDADSRL
ALIYSSLEQN DTEDPLGQTW DAYKHDPRSV TANAELYDTR KSIDHQQAGM NYERYFGEAT
LQVNAYVGKR SVVQYLSIPK GVVSNSQRGG GVVDFDRDFH GGTVRWLQPV RQAPGELNLT
VGLDYDQSRD DRRGYQNFNG DQLGVKGELR RDEVDTATSL DPYLQASWAI DAWTLQAGVR
HSTMKMEVDD RYLSNGDASG SRRYRKNTPS FSVMYAFTPD LHGYLSAGKG FETPTQAEMA
YAPVAANAPD VFNFGLKPAT SSQYEAGLKA RLWGNTRVNA AIFQIRTEDE IVVASSLGGR
TSYQNAGKTL RRGFELGVES ELSEHWNANL AYTRLSATYD SDFEAGGKTI GKGKHLPGVP
ASSLFGELVW KPVEGISMGW EGMYRSQVYV EDSNSEKAAP SYAVFNWRTR FEQRLGAWTF
HQLVRLDNLF DRQYVGSVIV GDGNRRYYEA APGLSWYAGA GVEYQF
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